RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 ZMYND19Q96E35 227 aaPredicted RBP12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 MARCH7Q9H992 704 aa12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 UPB1Q9UBR1 384 aa12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 Q9UFV3 132 aa12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 PRSS50Q9UI38 385 aa12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 PROCRQ9UNN8 238 aa12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 EXOGQ9Y2C4 368 aaKnown RBP12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 UGT2A1Q9Y4X1 527 aa12.9□□□□□ -0.34
SMPDL3B-201ENST00000373888 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 C1QL1O75973 258 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 KRT33AO76009 404 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 IGHV3-9P01782 118 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 CD8BP10966 210 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 LAP3P28838 519 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 OPRM1P35372 400 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 POU4F2Q12837 409 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 SOWAHCQ53LP3 525 aaPredicted RBP12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 ABHD12BQ7Z5M8 362 aaPredicted RBP12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 UBE2J2Q8N2K1 259 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF837Q96EG3 531 aaPredicted RBP12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 RBM24Q9BX46 236 aaKnown RBP12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
SMPDL3B-201ENST00000373888 HRGP04196 525 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 HSMCR30P0CW71 290 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 GADD45AP24522 165 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF84P51523 738 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 WNT4P56705 351 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 HSF2Q03933 536 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 CEACAM16Q2WEN9 425 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 LYPD4Q6UWN0 246 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 Q6ZT83 130 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 NCCRP1Q6ZVX7 275 aaPredicted RBP12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TIGD4Q8IY51 512 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF511Q8NB15 262 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 SLC26A10Q8NG04 563 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR51G2Q8NGK0 314 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TBC1D15Q8TC07 691 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 DYNC2LI1Q8TCX1 351 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 RND1Q92730 232 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR5M11Q96RB7 305 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 ADGRL4Q9HBW9 690 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 INPP5EQ9NRR6 644 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 A0A1W2PPL8 197 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 J3QRE1 110 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 CCL21O00585 134 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 GPANK1O95872 356 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TFP02787 698 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 SBK2P0C263 348 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 NR4A1P22736 598 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 CAPZA2P47755 286 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 VBP1P61758 197 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 MRPS34P82930 218 aaKnown RBP12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 FAPQ12884 760 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 IGFBP7Q16270 282 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TSTQ16762 297 aaKnown RBP12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF627Q7L945 461 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 S100ZQ8WXG8 99 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 NABP1Q96AH0 204 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 PPP1R14BQ96C90 147 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 FOXN4Q96NZ1 517 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 OPALINQ96PE5 141 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 PIGMQ9H3S5 423 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 SIAEQ9HAT2 523 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 POLE4Q9NR33 117 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TMEM38BQ9NVV0 291 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 TAS2R16Q9NYV7 291 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 A3GALT2U3KPV4 340 aa12.88□□□□□ -0.35
SMPDL3B-201ENST00000373888 A0A1B0GUH1 482 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 SELENOFO60613 162 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 IGHA1P01876 353 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 HLA-DQA2P01906 255 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 MRPL3P09001 348 aaKnown RBP12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 NAT2P11245 290 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 FOSL1P15407 271 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 PSMA1P25786 263 aaKnown RBP12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 MPGP29372 298 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 CDAP32320 146 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 ATP6V1E1P36543 226 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 GUCA1AP43080 201 aaPredicted RBP12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF829Q3KNS6 432 aaPredicted RBP12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR4F15Q8NGB8 312 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 NDNFQ8TB73 568 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 C11orf40Q8WZ69 217 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 INTS14Q96SY0 518 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 FOXB1Q99853 325 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 DCSTAMPQ9H295 470 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 WDR76Q9H967 626 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 SEC61A2Q9H9S3 476 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 PALMDQ9NP74 551 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
SMPDL3B-201ENST00000373888 CLEC2DQ9UHP7 191 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms