RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ZNF547Q8IVP9 402 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 PRR18Q8N4B5 295 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 OR52H1Q8NGJ2 320 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 ABHD6Q9BV23 337 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 NMNAT2Q9BZQ4 307 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 ACKR4Q9NPB9 350 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 GHRLQ9UBU3 117 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 A0A1W2PS29 197 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 TGM6O95932 706 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 C1QBP02746 253 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 QDPRP09417 244 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 GIPP09681 153 aaPredicted RBP9.54□□□□□ -0.88
NUP188-201ENST00000372577 CTXN2P0C2S0 81 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
NUP188-201ENST00000372577 PAQR6Q6TCH4 344 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 MSI2Q96DH6 328 aaKnown RBP9.54□□□□□ -0.88
NUP188-201ENST00000372577 CCDC74BQ96LY2 380 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 TSSK2Q96PF2 358 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 FOXQ1Q9C009 403 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 SERGEFQ9UGK8 458 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 CHST2Q9Y4C5 530 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 TTC3P53804 2025 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 IFITM5A6NNB3 132 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 MED6O75586 246 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 SNAPINO95295 136 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 WISP3O95389 354 aaPredicted RBP9.54□□□□□ -0.88
NUP188-201ENST00000372577 CHATP28329 748 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 LCN10Q6JVE6 187 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 ZADH2Q8N4Q0 377 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 IL1F10Q8WWZ1 152 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 SGK3Q96BR1 496 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 HINT2Q9BX68 163 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 LRFN1Q9P244 771 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 TRAPPC2LQ9UL33 140 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 KIR2DS1A0A191URI9 304 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 ARL3P36405 182 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 ARR3P36575 388 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 KIR2DS4P43632 304 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 KIR2DS1Q14954 304 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 LINC00696Q6ZRV3 163 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 SYT9Q86SS6 491 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 SPNS2Q8IVW8 549 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 FAM109AQ8N4B1 249 aa9.54□□□□□ -0.88
NUP188-201ENST00000372577 KRBOX1C9JBD0 128 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 G3V3Y1 287 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TIMM8AO60220 97 aaPredicted RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 STK17BO94768 372 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 LIPCP11150 499 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUP188-201ENST00000372577 ZNF425Q6IV72 752 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 BBS1Q8NFJ9 593 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 FAM212BQ9NTI7 297 aaPredicted RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 HMGN3Q15651 99 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 CTF1Q16619 201 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TRAPPC4Q9Y296 219 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ZC3H12DA2A288 527 aaKnown RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 MSTNO14793 375 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ARPC3O15145 178 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 XRCC2O43543 280 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 IFNA4P05014 189 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TUBG1P23258 451 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 S100A11P31949 105 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 RBP2P50120 134 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 POU4F3Q15319 338 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ZNF74Q16587 644 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 FBXW12Q6X9E4 464 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 LHFPL2Q6ZUX7 228 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ZNF845Q96IR2 970 aaPredicted RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 EXOSC3Q9NQT5 275 aaKnown RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 PRMT8Q9NR22 394 aaPredicted RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 C1orf196B1AJZ1 125 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TOX3O15405 576 aaPredicted RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 CYB5BO43169 146 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 CBR3O75828 277 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 RPS18P62269 152 aaKnown RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 AGERQ15109 404 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 PRICKLE4Q2TBC4 344 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TMEM81Q6P7N7 255 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 PLXDC2Q6UX71 529 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ABHD5Q8WTS1 349 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ATOH1Q92858 354 aaPredicted RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 DCLRE1CQ96SD1 692 aaKnown RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 OR51B6Q9H340 312 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 EPHA2P29317 976 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TGM4P49221 684 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 CCR6P51684 374 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 IL11RAQ14626 422 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 C9orf135Q5VTT2 229 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 LGI3Q8N145 548 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 TMEM68Q96MH6 324 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 ZNF285Q96NJ3 590 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 SLC22A11Q9NSA0 550 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 FOXJ3Q9UPW0 622 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 SIGLEC7Q9Y286 467 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 YBX2Q9Y2T7 364 aaKnown RBP9.53□□□□□ -0.88
NUP188-201ENST00000372577 MYO10Q9HD67 2058 aa9.53□□□□□ -0.88
NUP188-201ENST00000372577 IFNA17P01571 189 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms