RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 DAZAP1Q96EP5 407 aaKnown RBP10.46□□□□□ -0.74
PTPRF-203ENST00000372407 SMCO4Q9NRQ5 59 aa10.46□□□□□ -0.74
PTPRF-203ENST00000372407 TAS2R5Q9NYW4 299 aa10.46□□□□□ -0.74
PTPRF-203ENST00000372407 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 AGAP14A8MT82 685 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 APOBEC1P41238 236 aaKnown RBP10.45□□□□□ -0.74
PTPRF-203ENST00000372407 NKAIN1Q4KMZ8 207 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 AVPI1Q5T686 147 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 TMUB2Q71RG4 321 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 S100A7AQ86SG5 101 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 OR4N2Q8NGD1 307 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 YIPF5Q969M3 257 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 MED30Q96HR3 178 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 UBL7Q96S82 380 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-203ENST00000372407 CTRCQ99895 268 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 BCO1Q9HAY6 547 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 B3GALT5Q9Y2C3 310 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 TUBGCP6Q96RT7 1819 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 LOC107986453A0A1B0GWG9 222 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 AIPO00170 330 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 HSPB6O14558 160 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 VAMP5O95183 116 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 SLC2A10O95528 541 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 ETHE1O95571 254 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 GNB3P16520 340 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 CD27P26842 260 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 BSGP35613 385 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 GZMKP49863 264 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 RPS19BP1Q86WX3 136 aaKnown RBP10.45□□□□□ -0.74
PTPRF-203ENST00000372407 YIPF6Q96EC8 236 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 UHRF2Q96PU4 802 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 OR11A1Q9GZK7 315 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 C17orf112F2Z3M2 114 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 CYB5BO43169 146 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 CD1EP15812 388 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 PPICP45877 212 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 FABP5Q01469 135 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 RHOUQ7L0Q8 258 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 DOK3Q7L591 496 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 KANSL1Q7Z3B3 1105 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 SLC6A17Q9H1V8 727 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 ZC3H12DA2A288 527 aaKnown RBP10.45□□□□□ -0.74
PTPRF-203ENST00000372407 C2orf72A6NCS6 295 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 ST8SIA3O43173 380 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF749O43361 778 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 AKR7A3O95154 331 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 RFX2P48378 723 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 AQP6Q13520 282 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 ACKR1Q16570 336 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 TMEM41BQ5BJD5 291 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 H3F3CQ6NXT2 135 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 TEX19Q8NA77 164 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 OR51A4Q8NGJ6 313 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 GOT1L1Q8NHS2 421 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-203ENST00000372407 SMIM19Q96E16 107 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 EMC6Q9BV81 110 aa10.45□□□□□ -0.74
PTPRF-203ENST00000372407 PURGQ9UJV8 347 aaKnown RBP10.45□□□□□ -0.74
PTPRF-203ENST00000372407 MDFIC2A0A1B0GVS7 189 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF587BE7ETH6 402 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 H7C1Q1 480 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 DFFBO76075 338 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 NXPH2O95156 264 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 TGFBR1P36897 503 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 LTC4SQ16873 150 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 MAML2Q8IZL2 1156 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-203ENST00000372407 SEMA4CQ9C0C4 833 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 FGF20Q9NP95 211 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-203ENST00000372407 DYNLRB1Q9NP97 96 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 NECAP2Q9NVZ3 263 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 KIR2DS1A0A191URI9 304 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 IFITM5A6NNB3 132 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 OR2F2O95006 317 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 SOD1P00441 154 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 GABRB1P18505 474 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 PRPH2P23942 346 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 KIR2DS4P43632 304 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 SCGB2A2Q13296 93 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 OR2F1Q13607 317 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 KIR2DS1Q14954 304 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 CDK5R1Q15078 307 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 PHLDA2Q53GA4 152 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 BANF2Q9H503 90 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 CALHM2Q9HA72 323 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 HCCSP53701 268 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 TIGD3Q6B0B8 471 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 TMEM217Q8N7C4 229 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 WWTR1Q9GZV5 400 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 FKRPQ9H9S5 495 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 SPACA1Q9HBV2 294 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 PCDHB10Q9UN67 800 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 TTC3P53804 2025 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 TRIOBPQ9H2D6 2365 aa10.44□□□□□ -0.74
PTPRF-203ENST00000372407 A0A087WV62 115 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 STMND1H3BQB6 276 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 UPK1AO00322 258 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 SULT1C4O75897 302 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 NKAIN2Q5VXU1 208 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 LFNGQ8NES3 379 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 NANPQ8TBE9 248 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms