RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZNF814B7Z6K7 855 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 MCIDASD6RGH6 385 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 PLPP3O14495 311 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 BHLHE40O14503 412 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 PRKYO43930 277 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 HCN1O60741 890 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 RCBTB2O95199 551 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 AHSA1O95433 338 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 SLC2A10O95528 541 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 PPP1R3DO95685 299 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TFPIP10646 304 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 ZNF17P17021 662 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 GDF1P27539 372 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 ELK4P28324 431 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 GRPRP30550 384 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 SFTPDP35247 375 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 SLC9A3P48764 834 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 P2RY4P51582 365 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 SUCLG1P53597 346 aaKnown RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 MLLT10P55197 1068 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 CLDN20P56880 219 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TMPRSS3P57727 454 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 CXADRP78310 365 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 PLGLB1Q02325 96 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 RPL18Q07020 188 aaKnown RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 IL18R1Q13478 541 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 DYRK1AQ13627 763 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 MAD2L1BPQ15013 274 aaPredicted RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 OR7A5Q15622 319 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 SMN1Q16637 294 aaKnown RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 SYT14P1Q58G82 188 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TMEM154Q6P9G4 183 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 Q6ZS92 163 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TRILQ7L0X0 811 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 BCDIN3DQ7Z5W3 292 aaKnown RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 WDFY1Q8IWB7 410 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 C8orf59Q8N0T1 100 aaPredicted RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 ZADH2Q8N4Q0 377 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 ARL6IP6Q8N6S5 226 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TMEM178AQ8NBL3 297 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 MFSD8Q8NHS3 518 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 CNIH3Q8TBE1 160 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 FANK1Q8TC84 345 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 APH1BQ8WW43 257 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 NEU4Q8WWR8 484 aaPredicted RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 OSTF1Q92882 214 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 DDIT4LQ96D03 193 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 ELMOD3Q96FG2 381 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 DACH2Q96NX9 599 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 OR5B2Q96R09 309 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TAAR6Q96RI8 345 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 CITED2Q99967 270 aaPredicted RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 PIGQQ9BRB3 760 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 NAA11Q9BSU3 229 aaPredicted RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 DEFB127Q9H1M4 99 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 Q9H521 79 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 FKRPQ9H9S5 495 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 KRCC1Q9NPI7 259 aaPredicted RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 NRIP3Q9NQ35 241 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 NANSQ9NR45 359 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 SERINC1Q9NRX5 453 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TBCCD1Q9NVR7 557 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TVP23BQ9NYZ1 205 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 ZNF229Q9UJW7 825 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 LIPGQ9Y5X9 500 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 MAP1BP46821 2468 aaKnown RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 ACACBO00763 2458 aa3.15□□□□□ -1.91
MCF2-202ENST00000370573 TPRP12270 2363 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 TRAV34A0A0B4J273 112 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 EIF4E1BA6NMX2 242 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 BLOC1S5-TXNDC5H3BN57 136 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IMPA2O14732 288 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 OR2T1O43869 369 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 RAMP1O60894 148 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 AKR7A3O95154 331 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 NDUFB2O95178 105 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MT-ATP6P00846 226 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TPOP07202 933 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SNRNP70P08621 437 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 RPSAP08865 295 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 HLA-DOBP13765 273 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PTAFRP25105 342 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 FMO3P31513 532 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IDUAP35475 653 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 LHX2P50458 406 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 UCNP55089 124 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 OR2B6P58173 313 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SNRPGP62308 76 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 ERVK-25P63136 954 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SELENBP1Q13228 472 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PMS2P3Q13401 168 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SNTB1Q13884 538 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZNF169Q14929 603 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 SLC10A1Q14973 349 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SGCBQ16585 318 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PGGHGQ32M88 737 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 C6orf141Q5SZD1 244 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 RAB12Q6IQ22 244 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 C5orf46Q6UWT4 87 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TMPPEQ6ZT21 453 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms