RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 CACNA1CQ13936 2221 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 PLPP2O43688 288 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 OPRL1P41146 370 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 SERPINB10P48595 397 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 FABP5Q01469 135 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 OXA1LQ15070 435 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 KCTD18Q6PI47 426 aaPredicted RBP17.2■□□□□ 0.34
CHTOP-204ENST00000368694 CORO6Q6QEF8 472 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 LRRN1Q6UXK5 716 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 DCXRQ7Z4W1 244 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 MCEMP1Q8IX19 187 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 HDHD5Q9BXW7 423 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 MROQ9BYG7 248 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 EMC7Q9NPA0 242 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 ST6GALNAC2Q9UJ37 374 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 CLEC4AQ9UMR7 237 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 IGKV3D-15A0A087WSY6 115 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 TRBV2A0A0J9YWF9 115 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 WISP2O76076 250 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 HLA-DPB1P04440 258 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 CXADRP78310 365 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 CDK5R1Q15078 307 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 TEX30Q5JUR7 227 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 C10orf128Q5T292 105 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 LIPNQ5VXI9 398 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 C22orf42Q6IC83 251 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 RPL22L1Q6P5R6 122 aaKnown RBP17.2■□□□□ 0.34
CHTOP-204ENST00000368694 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.2■□□□□ 0.34
CHTOP-204ENST00000368694 KRT77Q7Z794 578 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 GPR137CQ8N3F9 429 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 MINDY2Q8NBR6 621 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 OR52N5Q8NH56 324 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 OR8B4Q96RC9 309 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 TXNL4BQ9NX01 149 aaKnown RBP17.2■□□□□ 0.34
CHTOP-204ENST00000368694 SLCO1C1Q9NYB5 712 aa17.2■□□□□ 0.34
CHTOP-204ENST00000368694 PRRC2CQ9Y520 2896 aaKnown RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 DHHO43323 396 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 MRPL33O75394 65 aaKnown RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 RNPS1Q15287 305 aaKnown RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 PCK2Q16822 640 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 CCDC58Q4VC31 144 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 DMKNQ6E0U4 476 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 TUSC5Q8IXB3 177 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 SMIM19Q96E16 107 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ALKBH3Q96Q83 286 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 CALHM2Q9HA72 323 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 LHX6Q9UPM6 363 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ATMQ13315 3056 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 CD8B2A6NJW9 211 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 AQP7O14520 342 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ZNHIT1O43257 154 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 UPK3AO75631 287 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ABHD16AO95870 558 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 CD8BP10966 210 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 EIF2B2P49770 351 aaKnown RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 GDI2P50395 445 aaKnown RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ZNF84P51523 738 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 SGCAQ16586 387 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 PLEKHN1Q494U1 663 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-204ENST00000368694 LINC00299Q6ZSB3 139 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 SIAH3Q8IW03 269 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ZNF679Q8IYX0 411 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 DYNC2LI1Q8TCX1 351 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 TMEM45BQ96B21 275 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 FAM122AQ96E09 287 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 ELOVL3Q9HB03 270 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 CRLF2Q9HC73 371 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 B3GAT2Q9NPZ5 323 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 POLE4Q9NR33 117 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 UGT2A1Q9Y4X1 527 aa17.19■□□□□ 0.34
CHTOP-204ENST00000368694 A0A1B0GVC2 190 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 SLC22A20A6NK97 555 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 OGG1O15527 345 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 WNT11O96014 354 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 UGT2B10P36537 528 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 ZNF133P52736 654 aaPredicted RBP17.18■□□□□ 0.34
CHTOP-204ENST00000368694 INSL4Q14641 139 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 CD200R1LQ6Q8B3 271 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 OR2AJ1Q8NGZ0 328 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 S100ZQ8WXG8 99 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 GHSRQ92847 366 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 SARAFQ96BY9 339 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 PGLYRP3Q96LB9 341 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 PRDM14Q9GZV8 571 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 CYB5R1Q9UHQ9 305 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 GSTK1Q9Y2Q3 226 aa17.18■□□□□ 0.34
CHTOP-204ENST00000368694 A0A1B0GTH9 108 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 GABRPO00591 440 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 RGS9O75916 674 aaPredicted RBP17.17■□□□□ 0.34
CHTOP-204ENST00000368694 KRT33AO76009 404 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 TGM4P49221 684 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 TUBA1BP68363 451 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 MRPL28Q13084 256 aaKnown RBP17.17■□□□□ 0.34
CHTOP-204ENST00000368694 OR7E24Q6IFN5 339 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 TUBA1AQ71U36 451 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 HAVCR2Q8TDQ0 301 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 ST7LQ8TDW4 575 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 HSD17B8Q92506 261 aa17.17■□□□□ 0.34
CHTOP-204ENST00000368694 DCLRE1CQ96SD1 692 aaKnown RBP17.17■□□□□ 0.34
CHTOP-204ENST00000368694 NELFAQ9H3P2 528 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms