RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ZFAND1Q8TCF1 268 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 ST6GAL2Q96JF0 529 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 SARGQ9BW04 601 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 CHRDQ9H2X0 955 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 BANF2Q9H503 90 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 C12orf4Q9NQ89 552 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 PLEKHJ1Q9NW61 149 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 PARPBPQ9NWS1 579 aa7.66□□□□□ -1.18
PTPRK-206ENST00000368215 NUPL2O15504 423 aaKnown RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 MBTPS2O43462 519 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 LANCL1O43813 399 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 MTRF1O75570 445 aaKnown RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 TP53P04637 393 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 CALCBP10092 127 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 GDF1P27539 372 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 ZNF93P35789 620 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 CAPZA1P52907 286 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 GPR85P60893 370 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 GABREP78334 506 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 SLC9A3R2Q15599 337 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 GUSBP11Q6P575 273 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 FAM199XQ6PEV8 388 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 ANGPTL5Q86XS5 388 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 SPEM1Q8N4L4 309 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 NPEPL1Q8NDH3 523 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 OR6M1Q8NGM8 313 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 OR2I1PQ8NGU4 316 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 OR51E1Q8TCB6 317 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 SMIM4Q8WVI0 70 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 C17orf50Q8WW18 174 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 SPTSSAQ969W0 71 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 FOXRED1Q96CU9 486 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 OR51B6Q9H340 312 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 ACKR4Q9NPB9 350 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 MBD2Q9UBB5 411 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 C4orf47A7E2U8 309 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 MPZL1O95297 269 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 THY1P04216 161 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 BCKDHBP21953 392 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 AGTR1P30556 359 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 PTGS2P35354 604 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 APOBEC1P41238 236 aaKnown RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 FASLGP48023 281 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 COL4A6Q14031 1691 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 WDR38Q5JTN6 314 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 ZNF546Q86UE3 836 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 OR52B4Q8NGK2 314 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 MIB2Q96AX9 1013 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 SLAMF6Q96DU3 332 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 CDC6Q99741 560 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 PRRT1Q99946 306 aa7.65□□□□□ -1.18
PTPRK-206ENST00000368215 MRPS28Q9Y2Q9 187 aaKnown RBP7.65□□□□□ -1.18
PTPRK-206ENST00000368215 RTTNQ86VV8 2226 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 SULT1B1O43704 296 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 RAF1P04049 648 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 NFYAP23511 347 aaPredicted RBP7.65□□□□□ -1.19
PTPRK-206ENST00000368215 DLSTP36957 453 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 ABHD17BQ5VST6 288 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 LCN10Q6JVE6 187 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 TMEM81Q6P7N7 255 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 CPEB2Q7Z5Q1 589 aaKnown RBP7.65□□□□□ -1.19
PTPRK-206ENST00000368215 ADGRE4PQ86SQ3 457 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 APOBEC4Q8WW27 367 aaKnown RBP7.65□□□□□ -1.19
PTPRK-206ENST00000368215 BORCS8Q96FH0 119 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 JAM3Q9BX67 310 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 TMEM59Q9BXS4 323 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 SLC22A11Q9NSA0 550 aa7.65□□□□□ -1.19
PTPRK-206ENST00000368215 MRPS18AQ9NVS2 196 aaKnown RBP7.65□□□□□ -1.19
PTPRK-206ENST00000368215 TCF20Q9UGU0 1960 aaKnown RBP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 CCSO14618 274 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 GPR171O14626 319 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 CD3DP04234 171 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 HOXC12P31275 282 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 SSR4P51571 173 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 CCL7P80098 99 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 PLP2Q04941 152 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 DOC2BQ14184 412 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 EBPQ15125 230 aaKnown RBP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 LINC00303Q3SY05 128 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 ZNF658BQ4V348 819 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 MDGA2Q7Z553 956 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 PXKQ7Z7A4 578 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 IQCF2Q8IXL9 164 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 LSMEM1Q8N8F7 131 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 OTOSQ8NHW6 89 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 PTDSS2Q9BVG9 487 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 S1PR5Q9H228 398 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 KCNK15Q9H427 330 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 FBXO9Q9UK97 447 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 IGHV3-15A0A0B4J1V0 119 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 ZNF780AO75290 641 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 RAD51DO75771 328 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 IGHV3-9P01782 118 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 APOC1P02654 83 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 UBCP0CG48 685 aaKnown RBP7.64□□□□□ -1.19
PTPRK-206ENST00000368215 CDAP32320 146 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 MMP15P51511 669 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 NXPH1P58417 271 aa7.64□□□□□ -1.19
PTPRK-206ENST00000368215 EGR3Q06889 387 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms