RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PHYHIPLQ96FC7 376 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 MACROD1Q9BQ69 325 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 SLCO5A1Q9H2Y9 848 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 UCK1Q9HA47 277 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 ACTR10Q9NZ32 417 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 CPNE7Q9UBL6 633 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 FBXL4Q9UKA2 621 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 CLEC4AQ9UMR7 237 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 COPS3Q9UNS2 423 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 KCNK6Q9Y257 313 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 MED13Q9UHV7 2174 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 ICE1Q9Y2F5 2266 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 A0A0A6YYH2 397 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 LILRA5A6NI73 299 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 A6NJ64 397 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 TMEM212A6NML5 194 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 H3BUI4 141 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 PRAMEF2O60811 474 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 PMS2P2O95744 297 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 ABHD16AO95870 558 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 HPP00738 406 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 CD8AP01732 235 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 LPLP06858 475 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 RAB3AP20336 220 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 CDK2P24941 298 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 MPGP29372 298 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 ACTBP60709 375 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 ACTG1P63261 375 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 LTBQ06643 244 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 ZMYND11Q15326 602 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 IGFBP7Q16270 282 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 FCRL6Q6DN72 434 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 FBXO42Q6P3S6 717 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 ANKRD16Q6P6B7 361 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 IZUMO1Q8IYV9 350 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 RFLNBQ8N5W9 214 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 OR1S1Q8NH92 325 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 LCN9Q8WX39 176 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 RNF166Q96A37 237 aaPredicted RBP10.39□□□□□ -0.75
USF1-201ENST00000368019 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 PDCD1LG2Q9BQ51 273 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.39□□□□□ -0.75
USF1-201ENST00000368019 SCPEP1Q9HB40 452 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 POT1Q9NUX5 634 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 KLK11Q9UBX7 282 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 STEAP1Q9UHE8 339 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 PLEKHA6Q9Y2H5 1048 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 KCNK7Q9Y2U2 307 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 IER3IP1Q9Y5U9 82 aa10.39□□□□□ -0.75
USF1-201ENST00000368019 SNRNP200O75643 2136 aaKnown RBP10.39□□□□□ -0.75
USF1-201ENST00000368019 MCIDASD6RGH6 385 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CYR61O00622 381 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 TSPAN4O14817 238 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 MTRF1O75570 445 aaKnown RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 UPK3AO75631 287 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ZFPL1O95159 310 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 STATHP02808 62 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 HRGP04196 525 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 GYPBP06028 91 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 SLC35E2P0CK97 266 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 VSIG10L2P0DP72 767 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CD37P11049 281 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 SLC25A4P12235 298 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ANXA7P20073 488 aaKnown RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 DCTDP32321 178 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 GABRA3P34903 492 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 NAA10P41227 235 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 CENPAP49450 140 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CAPZA1P52907 286 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 GFERP55789 205 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 RAB38P57729 211 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 FLI1Q01543 452 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 RASGEF1BQ0VAM2 473 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ZNHIT3Q15649 155 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 DEFB109BQ30KR1 87 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ZNF660Q6AZW8 331 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 RNF44Q7L0R7 432 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 SYT9Q86SS6 491 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 TMEM17Q86X19 198 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 PLXDC1Q8IUK5 500 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CCDC36Q8IYA8 594 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 LRRC75AQ8NAA5 344 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 AVL9Q8NBF6 648 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 OR4C16Q8NGL9 310 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 OR5AK2Q8NH90 309 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 GRHL3Q8TE85 626 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CXorf58Q96LI9 332 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 SLC25A21Q9BQT8 299 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 G6PC3Q9BUM1 346 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ALG12Q9BV10 488 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CHIAQ9BZP6 476 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 COMMD4Q9H0A8 199 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ARL6Q9H0F7 186 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 CDCP1Q9H5V8 836 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 BEX1Q9HBH7 125 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 IFT46Q9NQC8 304 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 HIF3AQ9Y2N7 669 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms