RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TAF9Q16594 264 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 FBXL14Q8N1E6 418 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 DVL3Q92997 716 aaPredicted RBP14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 CHEK1O14757 476 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 PLRG1O43660 514 aaKnown RBP14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 DUSP1P28562 367 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 SOHLH1Q5JUK2 328 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 FCRL6Q6DN72 434 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 LSRQ86X29 649 aaPredicted RBP14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 SEH1LQ96EE3 360 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 SOX7Q9BT81 388 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 CEPT1Q9Y6K0 416 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 MEIKINA0A087WXM9 373 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 SERTM2A0A1B0GWG4 89 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 CSO75390 466 aaKnown RBP14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 PFN3P60673 137 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 JAM3Q9BX67 310 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 COMMD5Q9GZQ3 224 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 DUSP22Q9NRW4 184 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 PPP1R3CQ9UQK1 317 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 GOLT1BQ9Y3E0 138 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 COX20Q5RI15 118 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 AFMIDQ63HM1 303 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 PAQR9Q6ZVX9 377 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 BATF2Q8N1L9 274 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 CLDN22Q8N7P3 220 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 HSD17B11Q8NBQ5 300 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 CRYGNQ8WXF5 182 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 NPPBP16860 134 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 IRS1P35568 1242 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 CLN3Q13286 438 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 SSX9Q7RTT3 188 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 OR52N1Q8NH53 320 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 ZNRF4Q8WWF5 429 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 TMEM230Q96A57 120 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 C20orf85Q9H1P6 137 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 PSORS1C1Q9UIG5 152 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 ANGPTL7O43827 346 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 CD22P20273 847 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 CLDN15P56746 228 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 KMT5CQ86Y97 462 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 OR52I1Q8NGK6 324 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 ALPLP05186 524 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 OR5G3P0C626 314 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 EMC4Q5J8M3 183 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 SLAMF6Q96DU3 332 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 SLAMF8Q9P0V8 285 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 POM121CA8CG34 1229 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 SLC31A2O15432 143 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 TRIM23P36406 574 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 ZNF85Q03923 595 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 SPCS2Q15005 226 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 SMN1Q16637 294 aaKnown RBP14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 OR1M1Q8NGA1 313 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 REEP6Q96HR9 211 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 OPALINQ96PE5 141 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 DAPP1Q9UN19 280 aa14.36□□□□□ -0.11
NUCKS1-201ENST00000367142 CCDC187A0A096LP49 1063 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 ZFP92A6NM28 416 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 APEHP13798 732 aaKnown RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 NKX2-1P43699 371 aaPredicted RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 OPCMLQ14982 345 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 TMEM240Q5SV17 173 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 RGS7BPQ6MZT1 257 aaPredicted RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 TMEM200AQ86VY9 491 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 OR10AD1Q8NGE0 317 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 KISS1RQ969F8 398 aaPredicted RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 TBC1D29Q9UFV1 150 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 C19orf53Q9UNZ5 99 aaPredicted RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 A0A087WZY1 265 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 CYTIPO60759 359 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 FAM157BP0CG42 384 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 DUSP2Q05923 314 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 RAB35Q15286 201 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 ZNF628Q5EBL2 1059 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 C17orf107Q6ZR85 190 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 SLC16A11Q8NCK7 471 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 OR2AK2Q8NG84 335 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 OXGR1Q96P68 337 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 POFUT1Q9H488 388 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 BANF2Q9H503 90 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 THBS1P07996 1170 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 TPBGQ13641 420 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 MS4A6EQ96DS6 147 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 SLC25A21Q9BQT8 299 aaPredicted RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 EMC6Q9BV81 110 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 DLL4Q9NR61 685 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 TMEM200CA6NKL6 621 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 ALKAL2Q6UX46 152 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 USP51Q70EK9 711 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 OR51E1Q8TCB6 317 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 APH1BQ8WW43 257 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 ST8SIA1Q92185 356 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 SLCO4A1Q96BD0 722 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 PINX1Q96BK5 328 aaKnown RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 LYSMD1Q96S90 227 aa14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 LIN7CQ9NUP9 197 aaKnown RBP14.35□□□□□ -0.11
NUCKS1-201ENST00000367142 KNDC1Q76NI1 1749 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms