RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ADGRE4PQ86SQ3 457 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 SMAP2Q8WU79 429 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-202ENST00000361545 A0A0U1RQK1 487 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 M0QYG6 137 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 M0R135 149 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 SPINT2O43291 252 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 PMP2P02689 132 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 PRKACAP17612 351 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 APEX1P27695 318 aaKnown RBP16.9■□□□□ 0.3
CLIP2-202ENST00000361545 PPP1CAP62136 330 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 IL11RAQ14626 422 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 ANKRD34AQ69YU3 496 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 OR10K1Q8NGX5 313 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 EID2BQ96D98 161 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 ZNF799Q96GE5 643 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 NDRG3Q9UGV2 375 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 IGLV3-16A0A075B6K0 115 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 ARPC4-TTLL3A0A0A6YYG9 625 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 A0A1W2PPV4 95 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 CHRNB1P11230 501 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 B4GALT1P15291 398 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 ETV1P50549 477 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 AGERQ15109 404 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 HACD4Q5VWC8 232 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 PTOV1Q86YD1 416 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 SLC7A5P1Q8MH63 180 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 GIMAP1Q8WWP7 306 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 TTC9Q92623 222 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 TAS2R4Q9NYW5 299 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 GHRLQ9UBU3 117 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 UBR3Q6ZT12 1888 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 LOC100289279A0A1B0GTE1 492 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 LAP3P28838 519 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 WIPI1Q5MNZ9 446 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-202ENST00000361545 B3GALT5Q9Y2C3 310 aa16.9■□□□□ 0.3
CLIP2-202ENST00000361545 OMGP23515 440 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 HNF4GQ14541 408 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 RBMS2Q15434 407 aaKnown RBP16.89■□□□□ 0.29
CLIP2-202ENST00000361545 TATDN3Q17R31 274 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 VASH2Q86V25 355 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 SLAMF9Q96A28 289 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 MCM3APO60318 1980 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 C5orf67F2Z3F1 127 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 RAB27BO00194 218 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 HEXAP06865 529 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF728P0DKX0 622 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 HOXA1P49639 335 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-202ENST00000361545 GK2Q14410 553 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-202ENST00000361545 HES3Q5TGS1 186 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 GALEQ14376 348 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF793Q6ZN11 406 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 SLC25A31Q9H0C2 315 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 FBXL4Q9UKA2 621 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 RAB22AQ9UL26 194 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 ARR3P36575 388 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 EMC4Q5J8M3 183 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 RDH10Q8IZV5 341 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 SMRP1Q8NCR6 262 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 FBXO7Q9Y3I1 522 aa16.89■□□□□ 0.29
CLIP2-202ENST00000361545 PRSS37A4D1T9 235 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ANKRD61A6NGH8 418 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 PIPP12273 146 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ACHEP22303 614 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 RBP2P50120 134 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 C9orf152Q5JTZ5 239 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF468Q5VIY5 522 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 HOXB3P14651 431 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 NAGAP17050 411 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 OGFOD3Q6PK18 319 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 CLDN22Q8N7P3 220 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 BBS1Q8NFJ9 593 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 OR13F1Q8NGS4 319 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 OR4A16Q8NH70 328 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 OR2V1Q8NHB1 315 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 SLCO4A1Q96BD0 722 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ING1Q9UK53 422 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 PDLIM3Q53GG5 364 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 RNLSQ5VYX0 342 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 WDR5BQ86VZ2 330 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 AMER3Q8N944 861 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 OR52N5Q8NH56 324 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 UPRTQ96BW1 309 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF419Q96HQ0 510 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 CFHR5Q9BXR6 569 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 EDARQ9UNE0 448 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 CEP290O15078 2479 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ABCD3P28288 659 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 FABP6P51161 128 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 HEPHL1Q6MZM0 1159 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 PAQR6Q6TCH4 344 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF547Q8IVP9 402 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 ALKBH3Q96Q83 286 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-202ENST00000361545 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 NMNAT2Q9BZQ4 307 aa16.88■□□□□ 0.29
CLIP2-202ENST00000361545 CDK4P11802 303 aa16.87■□□□□ 0.29
CLIP2-202ENST00000361545 SELEP16581 610 aa16.87■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF14P17017 642 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms