RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TMEM268Q5VZI3 342 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 OR2M7Q8NG81 312 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 RPUSD4Q96CM3 377 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF845Q96IR2 970 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 AKR1E2Q96JD6 320 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 VDAC3Q9Y277 283 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 NALCNQ8IZF0 1738 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 A0A087X0M5 115 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 A0A1B0GX30 115 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 TRDV1A0A1B0GX56 115 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 EPHA5P54756 1037 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 COL9A2Q14055 689 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 ZFPM2Q8WW38 1151 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 ARNTLO00327 626 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF354AO60765 605 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 YIF1AO95070 293 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 CCKARP32238 428 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 RPL29P47914 159 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 DCDP81605 110 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 TMEM102Q8N9M5 508 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 WDR83Q9BRX9 315 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 TAS2R5Q9NYW4 299 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 OR52A1Q9UKL2 312 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 TDRD15B5MCY1 1934 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 MRPS21P82921 87 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 TMEM184AQ6ZMB5 413 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC35D2Q76EJ3 337 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 GDF2Q9UK05 429 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 MYOM1P52179 1685 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 FER1L5A0AVI2 2057 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 ABHD16AO95870 558 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 MGMTP16455 207 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 NOVA1P51513 510 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SNRPEP62304 92 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 CDC20Q12834 499 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 LTC4SQ16873 150 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 LILRA2Q8N149 483 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 OR51A4Q8NGJ6 313 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 S1PR3Q99500 378 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 TIMM29Q9BSF4 260 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 BOCQ9BWV1 1114 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 DMRT3Q9NQL9 472 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 NDRG4Q9ULP0 352 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 A3GALT2U3KPV4 340 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 OR8G3PP0DMU2 310 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 LIPAP38571 399 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 HIST1H3AP68431 136 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 LBHQ53QV2 105 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 MARCH8Q5T0T0 291 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 GJC3Q8NFK1 279 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 DYRK2Q92630 601 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 HLA-CQ95604 372 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 ATP5SQ99766 215 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SPOCK3Q9BQ16 436 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 HES7Q9BYE0 225 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF154Q13106 437 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC25A43Q8WUT9 341 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SLAMF8Q9P0V8 285 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 RALYQ9UKM9 306 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 CHD5Q8TDI0 1954 aa12.18□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC5A10A0PJK1 596 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 BMPR1BO00238 502 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ABCD4O14678 606 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 BMPR1AP36894 532 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 Q499Y3 187 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 Q6ZSR6 202 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 HRASLS5Q96KN8 279 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CHST11Q9NPF2 352 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 DLL4Q9NR61 685 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ACOXLQ9NUZ1 547 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 LOC102723971A0A1B0GUV8 181 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 M0R143 59 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CRYBA1P05813 215 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ADGRE4PQ86SQ3 457 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 C3orf30Q96M34 536 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 MED18Q9BUE0 208 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 SMCHD1A6NHR9 2005 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 PAPLNO95428 1278 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 IVDP26440 423 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CSF2RBP32927 897 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ACKR1Q16570 336 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 NCR3LG1Q68D85 454 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 TSEN54Q7Z6J9 526 aaKnown RBP12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CADP27708 2225 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 TRAV34A0A0B4J273 112 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 LGI1O95970 557 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms