RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MDP1Q86V88 176 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 ALDH16A1Q8IZ83 802 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 IL17RDQ8NFM7 739 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 ZNRF4Q8WWF5 429 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 RFKQ969G6 155 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 FBXO17Q96EF6 278 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 TEAD3Q99594 435 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF503-AS2A6NEH8 195 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 SNTNA6NMZ2 147 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 M0R129 80 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 GPANK1O95872 356 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 MMP7P09237 267 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-201ENST00000356017 PATE4P0C8F1 98 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF32P17041 273 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 SLC2A5P22732 501 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 GSTT1P30711 240 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 CAPGP40121 348 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 VHLP40337 213 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 HSPA13P48723 471 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF83P51522 516 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 ADARB1P78563 741 aaKnown RBP13.54□□□□□ -0.24
TRIM13-201ENST00000356017 MEPCEQ7L2J0 689 aaKnown RBP13.54□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 SETD9Q8NE22 299 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 BBS1Q8NFJ9 593 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 GJC3Q8NFK1 279 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 OR2AJ1Q8NGZ0 328 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 FGFBP3Q8TAT2 258 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 Q96MT0 163 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 C1orf198Q9H425 327 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 MRPL22Q9NWU5 206 aaKnown RBP13.54□□□□□ -0.24
TRIM13-201ENST00000356017 NPAP1Q9NZP6 1156 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 ASH2LQ9UBL3 628 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
TRIM13-201ENST00000356017 IQCMA0A1B0GVH7 501 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 TVP23AA6NH52 213 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 A6NNC1 897 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 M0R1B8 84 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 IGLV1-44P01699 117 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 SERPINA5P05154 406 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ENTPD1P49961 510 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 AQP4P55087 323 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 TMED1Q13445 227 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 OCLNQ16625 522 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 MEP1BQ16820 701 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ENTHD1Q8IYW4 607 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 RADILQ96JH8 1075 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 INTS14Q96SY0 518 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 MARCH7Q9H992 704 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 RASSF1Q9NS23 344 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 WARS2Q9UGM6 360 aaKnown RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 CYB5R1Q9UHQ9 305 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 HSPE1-MOB4S4R3N1 261 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 USP9YO00507 2555 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 DEFB108AA8MXU0 73 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF14P17017 642 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 CD40P25942 277 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 IDH3GP51553 393 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 CDH11P55287 796 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 PSG4Q00888 419 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 PCK2Q16822 640 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 NCMAPQ5T1S8 102 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF691Q5VV52 312 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 SHFQ7M4L6 423 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 UBE2FQ969M7 185 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 C14orf79Q96F83 325 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 PLPPR2Q96GM1 343 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF75AQ96N20 296 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ZNF582Q96NG8 517 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-201ENST00000356017 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 OR2H1Q9GZK4 316 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 WDR76Q9H967 626 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 HAO2Q9NYQ3 351 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 LHFPL6Q9Y693 200 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 ICE1Q9Y2F5 2266 aa13.53□□□□□ -0.24
TRIM13-201ENST00000356017 DOPEY2Q9Y3R5 2298 aa13.52□□□□□ -0.24
TRIM13-201ENST00000356017 IGHV1-18A0A0C4DH31 117 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 ZNF593O00488 134 aaPredicted RBP13.52□□□□□ -0.25
TRIM13-201ENST00000356017 SGCEO43556 437 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 CRYAAP02489 173 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 HTR1FP30939 366 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 IL5RAQ01344 420 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 BSPH1Q075Z2 132 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 SNCBQ16143 134 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 PABPC1L2AQ5JQF8 200 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 BCDIN3DQ7Z5W3 292 aaKnown RBP13.52□□□□□ -0.25
TRIM13-201ENST00000356017 ERI1Q8IV48 349 aaKnown RBP13.52□□□□□ -0.25
TRIM13-201ENST00000356017 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 C8orf59Q8N0T1 100 aaPredicted RBP13.52□□□□□ -0.25
TRIM13-201ENST00000356017 PIK3IP1Q96FE7 263 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms