RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 B3GNT2Q9NY97 397 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 H2AFY2Q9P0M6 372 aaPredicted RBP10.32□□□□□ -0.76
SNCA-202ENST00000345009 TMEFF2Q9UIK5 374 aaPredicted RBP10.32□□□□□ -0.76
SNCA-202ENST00000345009 KCNG2Q9UJ96 466 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 POU2F3Q9UKI9 436 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 MOKQ9UQ07 419 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 SPEF1Q9Y4P9 236 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 IGLV1-36A0A0B4J1U3 117 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 IGKV1D-43A0A0B4J1Z2 117 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 DPRXA6NFQ7 191 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 ZAR1LA6NP61 321 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 ABCD4O14678 606 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 SERPINA5P05154 406 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 IDH3GP51553 393 aaPredicted RBP10.31□□□□□ -0.76
SNCA-202ENST00000345009 TUBA1BP68363 451 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 TUBA4AP68366 448 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 SCRN3Q0VDG4 424 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 AQP6Q13520 282 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 KCNMB1Q16558 191 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 ZNF362Q5T0B9 420 aaPredicted RBP10.31□□□□□ -0.76
SNCA-202ENST00000345009 SLX4IPQ5VYV7 408 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 TMEM236Q5W0B7 351 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 UNQ6126/PRO20091Q6UXV3 157 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 TUBA1AQ71U36 451 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 PACRGLQ8N7B6 248 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 GJC3Q8NFK1 279 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 OR2AJ1Q8NGZ0 328 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 TRUB1Q8WWH5 349 aaKnown RBP10.31□□□□□ -0.76
SNCA-202ENST00000345009 NABP1Q96AH0 204 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 RDH12Q96NR8 316 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 TSSK2Q96PF2 358 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 DDOQ99489 341 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 FN3KQ9H479 309 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 IMPAD1Q9NX62 359 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 NPAP1Q9NZP6 1156 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 CRNNQ9UBG3 495 aaPredicted RBP10.31□□□□□ -0.76
SNCA-202ENST00000345009 APCP25054 2843 aa10.31□□□□□ -0.76
SNCA-202ENST00000345009 PRODHO43272 600 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 TLX2O43763 284 aaPredicted RBP10.3□□□□□ -0.76
SNCA-202ENST00000345009 IGLV1-44P01699 117 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 SPI1P17947 270 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 APLNRP35414 380 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 GALK2Q01415 458 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 TEKQ02763 1124 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 SLC34A1Q06495 639 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 TBC1D28Q2M2D7 210 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 PLBD1Q6P4A8 553 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 ARL9Q6T311 187 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 SEZ6L2Q6UXD5 910 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 ZNF704Q6ZNC4 412 aaPredicted RBP10.3□□□□□ -0.76
SNCA-202ENST00000345009 CDC20BQ86Y33 519 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 CPOQ8IVL8 374 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 OR4F15Q8NGB8 312 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 OR8J1Q8NGP2 316 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 OR9Q1Q8NGQ5 310 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 OR6K6Q8NGW6 343 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 C11orf40Q8WZ69 217 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 ZNF416Q9BWM5 594 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 NMNAT2Q9BZQ4 307 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 OR51V1Q9H2C8 321 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 VCX3BQ9H321 246 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 FAIMQ9NVQ4 179 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
SNCA-202ENST00000345009 LRBAP50851 2863 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 RTTNQ86VV8 2226 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 IGHV1-18A0A0C4DH31 117 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 FAM183AA6NL82 134 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 SNTNA6NMZ2 147 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 FAM171A2A8MVW0 826 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 DCTN6O00399 190 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 CECR9P0C854 216 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 ZNF32P17041 273 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 PYCR1P32322 319 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 RPS7P62081 194 aaKnown RBP10.29□□□□□ -0.76
SNCA-202ENST00000345009 ADAM8P78325 824 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 NAAAQ02083 359 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 RAB39AQ14964 217 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 LRRC36Q1X8D7 754 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 KLHL12Q53G59 568 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 PABPC1L2AQ5JQF8 200 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 SLC35D3Q5M8T2 416 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 ADAM5Q6NVV9 412 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 CXXC5Q7LFL8 322 aaKnown RBP10.29□□□□□ -0.76
SNCA-202ENST00000345009 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.29□□□□□ -0.76
SNCA-202ENST00000345009 TCEANCQ8N8B7 351 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 ZNF555Q8NEP9 628 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 SLC30A7Q8NEW0 376 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 SLC26A10Q8NG04 563 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 IPCEF1Q8WWN9 437 aaPredicted RBP10.29□□□□□ -0.76
SNCA-202ENST00000345009 PTP4A1Q93096 173 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 FBXO17Q96EF6 278 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 FOXN4Q96NZ1 517 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 TMEM204Q9BSN7 226 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 OR2H1Q9GZK4 316 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 CDH20Q9HBT6 801 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 EMC7Q9NPA0 242 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 SMPD3Q9NY59 655 aaPredicted RBP10.29□□□□□ -0.76
SNCA-202ENST00000345009 EIF3KQ9UBQ5 218 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms