RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF250P15622 560 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF32P17041 273 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 FPR3P25089 353 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 GIFP27352 417 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 GDI2P50395 445 aaKnown RBP11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 UCP2P55851 309 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 KLF3P57682 345 aaPredicted RBP11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 MESTQ5EB52 335 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 SMARCD3Q6STE5 483 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 LINC00471Q8N535 108 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 OR52J3Q8NH60 311 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 POLE4Q9NR33 117 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 EIF3KQ9UBQ5 218 aaKnown RBP11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 TMCC3Q9ULS5 477 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
SIRPB3P-201ENST00000340424 IGLV3-9A0A075B6K5 115 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 TEX13CA0A0J9YWL9 993 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 A0A1W2PPW3 197 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 A8MV72 311 aaPredicted RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 B2RBV5 119 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 IMPA2O14732 288 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 GSC2O15499 205 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 CRLF1O75462 422 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 DIRAS1O95057 198 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 STAMBPO95630 424 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 TXNDC12O95881 172 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 MT-ND5P03915 603 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 LCKP06239 509 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 COX5BP10606 129 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF26P17031 533 aaPredicted RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 APEX1P27695 318 aaKnown RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 LAP3P28838 519 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 GZMKP49863 264 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 PSG4Q00888 419 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 SCRN3Q0VDG4 424 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 BLMHQ13867 455 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 SEC23BQ15437 767 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 CARTPTQ16568 116 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 DNM1P34Q6PK57 102 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 ARL9Q6T311 187 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 GLB1L2Q8IW92 636 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 PAQR4Q8N4S7 273 aaPredicted RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 CLDN22Q8N7P3 220 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 CPEB3Q8NE35 698 aaKnown RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 SYNPRQ8TBG9 265 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 FANK1Q8TC84 345 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 UBASH3BQ8TF42 649 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 SNX33Q8WV41 574 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 POM121L2Q96KW2 1035 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 Q96M85 177 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 SYT3Q9BQG1 590 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 CADM1Q9BY67 442 aaKnown RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 OR2H1Q9GZK4 316 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 TMEM160Q9NX00 188 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 DUSP13Q9UII6 198 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 NDRG4Q9ULP0 352 aaKnown RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 PRPF19Q9UMS4 504 aaKnown RBP11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 V9GYQ6 96 aa11.45□□□□□ -0.58
SIRPB3P-201ENST00000340424 ABCA1O95477 2261 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 ABCA2Q9BZC7 2435 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 C5orf49A4QMS7 147 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 OR10H3O60404 316 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 CCL2P13500 99 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 TUBG1P23258 451 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 CRABP1P29762 137 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 RRM2P31350 389 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 SLC6A6P31641 620 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 MSX2P35548 267 aaPredicted RBP11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 LSM6P62312 80 aaKnown RBP11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 NKPD1Q17RQ9 610 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 RFX4Q33E94 735 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 PCGF3Q3KNV8 242 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 RPL13AP3Q6NVV1 102 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 UGT2A3Q6UWM9 527 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZDHHC21Q8IVQ6 265 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 FOXN4Q96NZ1 517 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 SNX18Q96RF0 628 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF416Q9BWM5 594 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 C1orf21Q9H246 121 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 MAGIXQ9H6Y5 334 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 ELOVL3Q9HB03 270 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 TUBG2Q9NRH3 451 aa11.44□□□□□ -0.58
SIRPB3P-201ENST00000340424 H7C1C5 153 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ARPC3O15145 178 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 IDH3BO43837 385 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 KHDRBS3O75525 346 aaKnown RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 IGHV3-13P01766 116 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 IGFBP1P08833 259 aaPredicted RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 CTLA4P16410 223 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF23P17027 643 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms