RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 TMEM38AQ9H6F2 299 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 CRLF2Q9HC73 371 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 INPP5EQ9NRR6 644 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 STEAP1Q9UHE8 339 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 EVPLQ92817 2033 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 IDSB3KWA1 339 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 P2RX1P51575 399 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 SNRPGP62308 76 aaKnown RBP7.96□□□□□ -1.14
RTN3-202ENST00000339997 KIR2DS3Q14952 304 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 ZNF74Q16587 644 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 SLC48A1Q6P1K1 146 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 TEX261Q6UWH6 196 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 GRAMD2AQ8IUY3 354 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 SLC39A11Q8N1S5 342 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 OR8U1Q8NH10 309 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 OR52N1Q8NH53 320 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 MARCH1Q8TCQ1 289 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 PSMF1Q92530 271 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 DAZAP1Q96EP5 407 aaKnown RBP7.96□□□□□ -1.14
RTN3-202ENST00000339997 SGPP1Q9BX95 441 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 CDCA4Q9BXL8 241 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 OR10A2Q9H208 303 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 FBXL4Q9UKA2 621 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 PCDHB10Q9UN67 800 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 U3KQ87 197 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 METTL12A8MUP2 240 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 HSD17B6O14756 317 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 IGHG1P01857 330 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 APOA2P02652 100 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 CSNK1EP49674 416 aaKnown RBP7.96□□□□□ -1.14
RTN3-202ENST00000339997 MAMSTRQ6ZN01 415 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 MDGA2Q7Z553 956 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 FAM26EQ8N5C1 309 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 ZFP62Q8NB50 900 aaPredicted RBP7.96□□□□□ -1.14
RTN3-202ENST00000339997 HMGCLL1Q8TB92 370 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 ZBED3Q96IU2 234 aaPredicted RBP7.96□□□□□ -1.14
RTN3-202ENST00000339997 MED29Q9NX70 200 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 NPFFR2Q9Y5X5 522 aa7.96□□□□□ -1.14
RTN3-202ENST00000339997 UMAD1C9J7I0 102 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 CLEC3BP05452 202 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ACSM4P0C7M7 580 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SPI1P17947 270 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PRSS12P56730 875 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 MFAP5Q13361 173 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PRTGQ2VWP7 1150 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 NHLRC1Q6VVB1 395 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 CLEC1AQ8NC01 280 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 MYADMQ96S97 322 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SDF2Q99470 211 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 DHRS9Q9BPW9 319 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 TRAPPC2LQ9UL33 140 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 FAM96BQ9Y3D0 163 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 LOXHD1Q8IVV2 1947 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 DOT1LQ8TEK3 1739 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 TMEM129A0AVI4 362 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 POM121BA6NF01 834 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 GABARAPH6UMI1 98 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PYCARD-AS1I3L0S3 204 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 OR2C1O95371 312 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ZNF728P0DKX0 622 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 NTF3P20783 257 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 GJA4P35212 333 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 BAXQ07812 192 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ZBTB37Q5TC79 503 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ZNF620Q6ZNG0 422 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SLC16A12Q6ZSM3 486 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SLC16A14Q7RTX9 510 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 LRP11Q86VZ4 500 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 C17orf78Q8N4C9 275 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 OR1S2Q8NGQ3 325 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 OR51E1Q8TCB6 317 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ZNF566Q969W8 418 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 RPUSD4Q96CM3 377 aaKnown RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 PLPPR2Q96GM1 343 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 LRFN5Q96NI6 719 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ANKRD19PQ9H560 264 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 CDH20Q9HBT6 801 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 OBP2BQ9NPH6 170 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PTTG3PQ9NZH4 202 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 A3GALT2U3KPV4 340 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SH2D7A6NKC9 451 aaPredicted RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 NRG2O14511 850 aaPredicted RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 SLCO2B1O94956 709 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 THBS1P07996 1170 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 TRHRP34981 398 aaPredicted RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 METAP1P53582 386 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SLC7A9P82251 487 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 TAF9Q16594 264 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 ZNF239Q16600 458 aaKnown RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 SLC16A13Q7RTY0 426 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 STT3BQ8TCJ2 826 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 RNF128Q8TEB7 428 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 NXPE3Q969Y0 559 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 FAM103A1Q9BTL3 118 aaKnown RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 FGF22Q9HCT0 170 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 C1orf123Q9NWV4 160 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 HS3ST2Q9Y278 367 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SLC45A1Q9Y2W3 748 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 CACNA1SQ13698 1873 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms