RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ETFBKMTQ8IXQ9 262 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 FAM217AQ8IXS0 508 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF595Q8IYB9 648 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PHTF2Q8N3S3 785 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C2orf73Q8N5S3 287 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C12orf29Q8N999 325 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZBTB44Q8NCP5 570 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM185AQ8NFB2 350 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C10orf82Q8WW14 230 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PERPQ96FX8 193 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 F2RL3Q96RI0 385 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C19orf24Q9BVV8 132 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 STARD5Q9NSY2 213 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 NSG2Q9Y328 171 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 A0A087WZY1 265 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 IGKV6D-21A0A0A0MT36 114 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 A0A0B4J203 849 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 TRBV2A0A0J9YWF9 115 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 TRDV1A0A1B0GX56 115 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 OR6C68A6NDL8 312 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 NKX6-3A6NJ46 265 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 SEC14L6B5MCN3 397 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 TNFSF12O43508 249 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 SCO1O75880 301 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 ATP1B2P14415 290 aaPredicted RBP3.03□□□□□ -1.93
CSMD3-202ENST00000339701 GABRB1P18505 474 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 CBLP22681 906 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 RELAQ04206 551 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 BAXQ07812 192 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 TNK1Q13470 666 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 PMVKQ15126 192 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 RPE65Q16518 533 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 KRTCAP3Q53RY4 240 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 NANOGP8Q6NSW7 305 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 PWWP2BQ6NUJ5 590 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 OR6K3Q8NGY3 331 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 OR4K15Q8NH41 348 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 SCMH1Q96GD3 660 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 NPAS1Q99742 590 aa3.03□□□□□ -1.93
CSMD3-202ENST00000339701 DOCK11Q5JSL3 2073 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NUP210LQ5VU65 1888 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 THBS1P07996 1170 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TRHRP34981 398 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OPRD1P41143 372 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 KIR2DS2P43631 304 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF154Q13106 437 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR52L2PQ8NGH6 319 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 LRTOMTQ8WZ04 291 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FOXN4Q96NZ1 517 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PIMREGQ9BSJ6 248 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PDZD7Q9H5P4 517 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SERTAD4Q9NUC0 356 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FCF1Q9Y324 198 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GOSR1O95249 250 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C1QBP02746 253 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OPN1SWP03999 348 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 DAOP14920 347 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MGMTP16455 207 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CELP19835 753 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CD200P41217 278 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 HERVK_113P61574 105 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 B3GNT9Q6UX72 402 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PTOV1Q86YD1 416 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NAT8LQ8N9F0 302 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TSLPQ969D9 159 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ANKRD9Q96BM1 317 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF689Q96CS4 500 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 WWTR1Q9GZV5 400 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GSKIPQ9P0R6 139 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CD300AQ9UGN4 299 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NAT8BQ9UHF3 227 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OSGIN2Q9Y236 505 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 IFNL4K9M1U5 179 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PSMD9O00233 223 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GPR32O75388 356 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 HPNP05981 417 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CD79AP11912 226 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ITGB7P26010 798 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 IVDP26440 423 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FASLGP48023 281 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 JAM2P57087 298 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR2B8PP59922 312 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SLC9A3R2Q15599 337 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 Q499Y3 187 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ATPAF1Q5TC12 328 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM108Q6UXF1 575 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF546Q86UE3 836 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SLC22A24Q8N4F4 322 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ARL6IP6Q8N6S5 226 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZBTB34Q8NCN2 500 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 HUS1BQ8NHY5 278 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CPNE4Q96A23 557 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 KCNA7Q96RP8 456 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MS4A7Q9GZW8 240 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM38AQ9H6F2 299 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GOLGA2P5Q9HBQ8 144 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZBTB20Q9HC78 741 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CHST7Q9NS84 486 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TEX50A0A1B0GTY4 177 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms