RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 C7orf50Q9BRJ6 194 aaKnown RBP13.62□□□□□ -0.23
C9orf47-201ENST00000334490 ZFP64Q9NPA5 681 aa13.62□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF71Q9NQZ8 489 aaPredicted RBP13.62□□□□□ -0.23
C9orf47-201ENST00000334490 FAIMQ9NVQ4 179 aa13.62□□□□□ -0.23
C9orf47-201ENST00000334490 TCFL5Q9UL49 500 aa13.62□□□□□ -0.23
C9orf47-201ENST00000334490 TMEM129A0AVI4 362 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 LINC01387J3KSC0 135 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 EDDM3AQ14507 147 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 ZMAT3Q9HA38 289 aaKnown RBP13.61□□□□□ -0.23
C9orf47-201ENST00000334490 LIN7BQ9HAP6 207 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 TBCCD1Q9NVR7 557 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 M0R1B8 84 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 DPM1O60762 260 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 RGS19P49795 217 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 MEOX1P50221 254 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 ETV1P50549 477 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 USP51Q70EK9 711 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 PARP16Q8N5Y8 322 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 NANOGP1Q8N7R0 232 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 LRRC20Q8TCA0 184 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 KTI12Q96EK9 354 aaPredicted RBP13.61□□□□□ -0.23
C9orf47-201ENST00000334490 OCSTAMPQ9BR26 566 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 NOX3Q9HBY0 568 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 GPR173Q9NS66 373 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 FAM157BP0CG42 384 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 IL7P13232 177 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 NR4A2P43354 598 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 OR8G1Q15617 311 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 APOOLQ6UXV4 268 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 TMEM179BQ7Z7N9 219 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 ATF6BQ99941 703 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 GABARAPL3Q9BY60 117 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 IGHV5-10-1A0A0J9YXX1 117 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 NKX6-3A6NJ46 265 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 TNFRSF10AO00220 468 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 MAGEB4O15481 346 aaPredicted RBP13.61□□□□□ -0.23
C9orf47-201ENST00000334490 PRAF2O60831 178 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 OR8U9P0C7N5 309 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 CLDN6P56747 220 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 BDH1Q02338 343 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 CEACAM16Q2WEN9 425 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 SYT6Q5T7P8 510 aaPredicted RBP13.61□□□□□ -0.23
C9orf47-201ENST00000334490 ANKRD16Q6P6B7 361 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 BATF2Q8N1L9 274 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 CLDN22Q8N7P3 220 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 BBS1Q8NFJ9 593 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 ZG16BQ96DA0 208 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 GABARAPL1Q9H0R8 117 aa13.61□□□□□ -0.23
C9orf47-201ENST00000334490 hCG_1809904A0A1W2PP81 198 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 A0A1W2PPE2 198 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 A0A1W2PR64 198 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 A0A1W2PRV1 198 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 ASPDHA6ND91 283 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 I3L521 148 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 CT62P0C5K7 136 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 CLEC2LP0C7M8 214 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 CALHM3Q86XJ0 350 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 EMG1Q92979 244 aaKnown RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 MBOAT4Q96T53 435 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 RTL8AQ9BWD3 113 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 STARD6P59095 220 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 RNF165Q6ZSG1 346 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 SERTM1A2A2V5 107 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 PDGFBP01127 241 aaPredicted RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 EMP3P54852 163 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 SLC35A2P78381 396 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 JMJD6Q6NYC1 403 aaPredicted RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 LAX1Q8IWV1 398 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF679Q8IYX0 411 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 GPR87Q9BY21 358 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 BARHL1Q9BZE3 327 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 ING1Q9UK53 422 aaPredicted RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 RBP2P50120 134 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 PAN3Q58A45 887 aaKnown RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 OR2A2Q6IF42 318 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 PRSS42Q7Z5A4 293 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 CD300LFQ8TDQ1 290 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 SECTM1Q8WVN6 248 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 DUS3LQ96G46 650 aaKnown RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF768Q9H5H4 540 aaKnown RBP13.6□□□□□ -0.23
C9orf47-201ENST00000334490 FBXO34Q9NWN3 711 aa13.6□□□□□ -0.23
C9orf47-201ENST00000334490 NCOR1O75376 2440 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 EFSO43281 561 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 TFP02787 698 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 UBBP0CG47 229 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 SELEP16581 610 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 FABP6P51161 128 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 RAB31Q13636 194 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 SHBQ15464 509 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 PAQR6Q6TCH4 344 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 FBXW12Q6X9E4 464 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms