RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SBK2P0C263 348 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 PRKAR1BP31321 381 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 LUMP51884 338 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SPOCK1Q08629 439 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SLC25A35Q3KQZ1 300 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 C1orf94Q6P1W5 598 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MRGPREQ86SM8 312 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 GRAMD2AQ8IUY3 354 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SLC38A6Q8IZM9 456 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 BPIFB2Q8N4F0 458 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 OR11G2Q8NGC1 345 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 OR4N2Q8NGD1 307 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 FLVCR1-AS1Q8TAF5 88 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF417Q8TAU3 575 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SPACA9Q96E40 222 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 PHB2Q99623 299 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 NRIP3Q9NQ35 241 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 RPS10P5Q9NQ39 176 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF281Q9Y2X9 895 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 CHD7Q9P2D1 2997 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 BRCA2P51587 3418 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 OR2T1O43869 369 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 FBXO24O75426 580 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 CSTBP04080 98 aaKnown RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 PTHLHP12272 177 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 RAD52P43351 418 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 RFX2P48378 723 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 C21orf58P58505 322 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 RPL22L1Q6P5R6 122 aaKnown RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 DNM1P34Q6PK57 102 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 C16orf47Q6ZP98 133 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MAMDC2Q7Z304 686 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SCGB3A2Q96PL1 93 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 ATF6BQ99941 703 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 C1QTNF6Q9BXI9 259 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MFRPQ9BY79 579 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 BIN3Q9NQY0 253 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 PARPBPQ9NWS1 579 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 FOXJ2Q9P0K8 574 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MYOTQ9UBF9 498 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 TESQ9UGI8 421 aaKnown RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 CACNA1BQ00975 2339 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 C4orf51C9J302 202 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 NPIPA2E9PIF3 369 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 NPIPA3F8WFD2 350 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 GPR171O14626 319 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 GMDSO60547 372 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 HPP00738 406 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MSL3P1P0C860 447 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 NID1P14543 1247 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 NAT1P18440 290 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 POU3F2P20265 443 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MFSD13AQ14CX5 517 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 TSC22D1Q15714 1073 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 YIF1BQ5BJH7 314 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 UBE2NLQ5JXB2 153 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 OR7E24Q6IFN5 339 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 OR5T2Q8NGG2 359 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 TTC9Q92623 222 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 LMF2Q9BU23 707 aaKnown RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SLC52A3Q9NQ40 469 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 ACOXLQ9NUZ1 547 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 PLA2G3Q9NZ20 509 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 HRH3Q9Y5N1 445 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 H3BUI4 141 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 M0QYG6 137 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 SULT2B1O00204 365 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 SYT5O00445 386 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 MTRF1O75570 445 aaKnown RBP10.68□□□□□ -0.7
HDAC6-201ENST00000334136 NKX2-2O95096 273 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 IL33O95760 270 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 CBX7O95931 251 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 UBBP0CG47 229 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 UBCP0CG48 685 aaKnown RBP10.68□□□□□ -0.7
HDAC6-201ENST00000334136 AMY2BP19961 511 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 HOXC12P31275 282 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 MRPS10P82664 201 aaKnown RBP10.68□□□□□ -0.7
HDAC6-201ENST00000334136 SPIN3Q5JUX0 258 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 DPY19L4Q7Z388 723 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 RBP7Q96R05 134 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 INPP5EQ9NRR6 644 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 KLK11Q9UBX7 282 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 TRBV5-3A0A0A0MS03 114 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 TMEM82A0PJX8 343 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ICOSLGO75144 302 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 RAB40ALP0C0E4 278 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 SLC2A5P22732 501 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ABCD3P28288 659 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 MSX1P28360 303 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF79Q15937 498 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 AANATQ16613 207 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 LAIR2Q6ISS4 152 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 JMJD6Q6NYC1 403 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-201ENST00000334136 TMEM88Q6PEY1 159 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 CMIPQ8IY22 773 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ACBD4Q8NC06 268 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 NPRL2Q8WTW4 380 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 RAB40AQ8WXH6 277 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms