RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GPN3Q9UHW5 284 aaPredicted RBP15.58■□□□□ 0.08
DDX28-201ENST00000332395 CFAP54Q96N23 3096 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 IGKV1D-43A0A0B4J1Z2 117 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 B8ZZF3 427 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 SULT1B1O43704 296 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 CER1O95813 267 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 CDK2P24941 298 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 CCR6P51684 374 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 CATSPERDQ86XM0 798 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 AGBL5Q8NDL9 886 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 OR2M3Q8NG83 312 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 SCMH1Q96GD3 660 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 FANCFQ9NPI8 374 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 SERINC1Q9NRX5 453 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 KLHL9Q9P2J3 617 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 STEAP1Q9UHE8 339 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 FBXL2Q9UKC9 423 aa15.57■□□□□ 0.08
DDX28-201ENST00000332395 LOC102723996A0A087X1L8 192 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 A0A1W2PNV4 684 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 C7orf66A4D0T2 115 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 CSRP1P21291 193 aaKnown RBP15.56■□□□□ 0.08
DDX28-201ENST00000332395 ZXDAP98168 799 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 TRIM61Q5EBN2 209 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 NDUFAF7Q7L592 441 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 DEFB123Q8N688 67 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 HYLS1Q96M11 299 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 CMKLR1Q99788 373 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 B3GAT1Q9P2W7 334 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 SLC23A1Q9UHI7 598 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 ARPC4-TTLL3A0A0A6YYG9 625 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 KRT33AO76009 404 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 KLK3P07288 261 aaPredicted RBP15.56■□□□□ 0.08
DDX28-201ENST00000332395 CCL4P13236 92 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 DUSP3P51452 185 aaPredicted RBP15.56■□□□□ 0.08
DDX28-201ENST00000332395 SCAND1P57086 179 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 TRA2AQ13595 282 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX28-201ENST00000332395 PCK2Q16822 640 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 C3orf33Q6P1S2 294 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 DCXRQ7Z4W1 244 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 GLB1L2Q8IW92 636 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 OR5M1Q8NGP8 315 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 MR1Q95460 341 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 TMEM185BQ9H7F4 350 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 MRPL15Q9P015 296 aaKnown RBP15.56■□□□□ 0.08
DDX28-201ENST00000332395 DHDHQ9UQ10 334 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 RCE1Q9Y256 329 aa15.56■□□□□ 0.08
DDX28-201ENST00000332395 RPH3AQ9Y2J0 694 aaPredicted RBP15.56■□□□□ 0.08
DDX28-201ENST00000332395 SRSF10O75494 262 aaKnown RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 KHDRBS3O75525 346 aaKnown RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 PRKACBP22694 351 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 CFPP27918 469 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 BIDP55957 195 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ASPHD2Q6ICH7 369 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 FAM198BQ6UWH4 519 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 LINC00346Q8IVM7 164 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 C9orf62Q8N4C0 152 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ST7LQ8TDW4 575 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 FCAMRQ8WWV6 532 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 EMC6Q9BV81 110 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 GHITMQ9H3K2 345 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 FBXL3Q9UKT7 428 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 SPEF1Q9Y4P9 236 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 R4GMQ9 66 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 IGHV1-45A0A0A0MS14 117 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 TEX51A0A1B0GUA7 166 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 AQP8O94778 261 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ECDO95905 644 aaPredicted RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 OPN1LWP04000 364 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 UMODP07911 640 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 CELA2AP08217 269 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 TMIGD3P0DMS9 266 aaPredicted RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 MNDAP41218 407 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 MRPS10P82664 201 aaKnown RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 FOXK1P85037 733 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ZFP36L1Q07352 338 aaKnown RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 PLA2G7Q13093 441 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ZNF782Q6ZMW2 699 aaPredicted RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 C1orf210Q8IVY1 113 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 WDSUB1Q8N9V3 476 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ASB5Q8WWX0 329 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 ZC3H10Q96K80 434 aaKnown RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 ARPC5LQ9BPX5 153 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 NARFLQ9H6Q4 476 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 KLK11Q9UBX7 282 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 EMC9Q9Y3B6 208 aa15.55■□□□□ 0.08
DDX28-201ENST00000332395 PTRH2Q9Y3E5 179 aaKnown RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 CHCHD2Q9Y6H1 151 aaPredicted RBP15.55■□□□□ 0.08
DDX28-201ENST00000332395 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 PTHLHP12272 177 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 TAS2R20P59543 309 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 TOR2AQ5JU69 321 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 PRAMEF20Q5VT98 475 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 BTN2A1Q7KYR7 527 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 MED28Q9H204 178 aa15.54■□□□□ 0.08
DDX28-201ENST00000332395 EIF3KQ9UBQ5 218 aaKnown RBP15.54■□□□□ 0.08
DDX28-201ENST00000332395 TP53I11O14683 189 aa15.53■□□□□ 0.08
DDX28-201ENST00000332395 KLF7O75840 302 aaPredicted RBP15.53■□□□□ 0.08
DDX28-201ENST00000332395 LDOC1O95751 146 aaPredicted RBP15.53■□□□□ 0.08
DDX28-201ENST00000332395 HRGP04196 525 aa15.53■□□□□ 0.08
DDX28-201ENST00000332395 ITGA5P08648 1049 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms