RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SLC15A3Q8IY34 581 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 PCYOX1LQ8NBM8 494 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 KLF14Q8TD94 323 aaPredicted RBP10.48□□□□□ -0.73
TPM3-204ENST00000323144 RASD2Q96D21 266 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 TMPRSS13Q9BYE2 586 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 LRMDAQ9H2I8 198 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 MSL2Q9HCI7 577 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 POLE4Q9NR33 117 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 GID8Q9NWU2 228 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 GPR160Q9UJ42 338 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 ARHGAP32A7KAX9 2087 aa10.48□□□□□ -0.73
TPM3-204ENST00000323144 A0A087WUU8 490 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 TRAV20A0A0B4J274 112 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 TEX13CA0A0J9YWL9 993 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 ISPDA4D126 451 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 GMNCA6NCL1 334 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 PLPP2O43688 288 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 ICMTO60725 284 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 SERPINA1P01009 418 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 NR2C1P13056 603 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 CTLA4P16410 223 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 GSK3BP49841 420 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 TMEM33P57088 247 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 PRKCDQ05655 676 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 DBPQ10586 325 aaPredicted RBP10.47□□□□□ -0.73
TPM3-204ENST00000323144 KRR1Q13601 381 aaKnown RBP10.47□□□□□ -0.73
TPM3-204ENST00000323144 TRAM2Q15035 370 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 IFI44LQ53G44 452 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 FAM27BQ5VT28 67 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 LIPNQ5VXI9 398 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 MBNL2Q5VZF2 373 aaKnown RBP10.47□□□□□ -0.73
TPM3-204ENST00000323144 FAM205BPQ63HN1 556 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 C8orf82Q6P1X6 216 aaPredicted RBP10.47□□□□□ -0.73
TPM3-204ENST00000323144 ZNF730Q6ZMV8 503 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 FAM122BQ7Z309 247 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 ARPINQ7Z6K5 226 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 OAFQ86UD1 273 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 TREML1Q86YW5 311 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 FAM86B1Q8N7N1 296 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 ACOT11Q8WXI4 607 aaPredicted RBP10.47□□□□□ -0.73
TPM3-204ENST00000323144 RAB39BQ96DA2 213 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 FAM46AQ96IP4 442 aaKnown RBP10.47□□□□□ -0.73
TPM3-204ENST00000323144 Q96M85 177 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 ZNF570Q96NI8 536 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 GAL3ST1Q99999 423 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 FNDC11Q9BVV2 318 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 KCNN2Q9H2S1 579 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 DECR2Q9NUI1 292 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 METRNQ9UJH8 293 aa10.47□□□□□ -0.73
TPM3-204ENST00000323144 A6NIZ1 184 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 UBOX5O94941 541 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 ABHD16AO95870 558 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 MT-ND5P03915 603 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 COX4I1P13073 169 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 GCH1P30793 250 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 HTR5AP47898 357 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 LIMS1P48059 325 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 NUDT2P50583 147 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 RAP1BP61224 184 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 RAP1AP62834 184 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 HFEQ30201 348 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 ZNF718Q3SXZ3 478 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 FAHD2BQ6P2I3 314 aaPredicted RBP10.46□□□□□ -0.73
TPM3-204ENST00000323144 MBOAT2Q6ZWT7 520 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 CBLL1Q75N03 491 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 C1QL2Q7Z5L3 287 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 SLC7A6Q92536 515 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 ELMOD3Q96FG2 381 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 FAHD2AQ96GK7 314 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 SLC6A7Q99884 636 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 CCDC134Q9H6E4 229 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 MRGBPQ9NV56 204 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 IL20RAQ9UHF4 553 aa10.46□□□□□ -0.73
TPM3-204ENST00000323144 PLSCR5A0PG75 271 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 H3BSA7 217 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 SLC22A2O15244 555 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 TIMM8AO60220 97 aaPredicted RBP10.45□□□□□ -0.74
TPM3-204ENST00000323144 GPANK1O95872 356 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 RPL4P36578 427 aaKnown RBP10.45□□□□□ -0.74
TPM3-204ENST00000323144 FXYD6P3P58550 94 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 ACTG1P63261 375 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 LCN2P80188 198 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 TEKQ02763 1124 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 FGD3Q5JSP0 725 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 ACSM5Q6NUN0 579 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 Q6ZR03 302 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 VASH1Q7L8A9 365 aaPredicted RBP10.45□□□□□ -0.74
TPM3-204ENST00000323144 FAM156AQ8NDB6 213 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 SLC7A13Q8TCU3 470 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 LZICQ8WZA0 190 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 CCL17Q92583 94 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 FAM162AQ96A26 154 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 SYT4Q9H2B2 425 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 UBAP1Q9NZ09 502 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 EIF3KQ9UBQ5 218 aaKnown RBP10.45□□□□□ -0.74
TPM3-204ENST00000323144 V9GYQ6 96 aa10.45□□□□□ -0.74
TPM3-204ENST00000323144 A0A0G2JMP0 313 aa10.44□□□□□ -0.74
TPM3-204ENST00000323144 TRBV4-1A0A0J9YWV2 114 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms