RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ID2Q02363 134 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 LTB4RQ15722 352 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 GUK1Q16774 197 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PSRC1Q6PGN9 363 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 NECAP2Q9NVZ3 263 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 KCMF1Q9P0J7 381 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 FLVCR2Q9UPI3 526 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ASPDHA6ND91 283 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CCL16O15467 120 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 KLF8O95600 359 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF888P0CJ79 500 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 DHPSP49366 369 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 MALLQ13021 153 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 EXOSC6Q5RKV6 272 aaKnown RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CBLN2Q8IUK8 224 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CCKARP32238 428 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CTSOP43234 321 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 KCNJ3P48549 501 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SQSTM1Q13501 440 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 MSMO1Q15800 293 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 RNF175Q8N4F7 328 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 GPR119Q8TDV5 335 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ISG20Q96AZ6 181 aaKnown RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TOE1Q96GM8 510 aaKnown RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TNFRSF12AQ9NP84 129 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 KDM4EB2RXH2 506 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 MMP11P24347 488 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 RPL12P30050 165 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GATMP50440 423 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 BLKP51451 505 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 RNLSQ5VYX0 342 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ZFP62Q8NB50 900 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 MAP3K3Q99759 626 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PARD6AQ9NPB6 346 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PADI1Q9ULC6 663 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GPR55Q9Y2T6 319 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 HMGN2P05204 90 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TYRP1P17643 537 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TEAD1P28347 426 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 DEFB134Q4QY38 66 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 LKAAEAR1Q8TD35 194 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GPR174Q9BXC1 333 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ISG20L2Q9H9L3 353 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ELOVL3Q9HB03 270 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GPR173Q9NS66 373 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TAAR2Q9P1P5 351 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 G3V3Q6 166 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 RTCAO00442 366 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 DUSP11O75319 330 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM225BP0DP42 221 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ARRB1P49407 418 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CARD18P57730 90 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 EGR3Q06889 387 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 LINC00303Q3SY05 128 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 MANEAQ5SRI9 462 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 USP53Q70EK8 1073 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ABHD12BQ7Z5M8 362 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 LTBP4Q8N2S1 1624 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PRAMEF27A3QJZ7 478 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GSTZ1O43708 216 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GNG10P50151 68 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PPP1CBP62140 327 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CTBSQ01459 385 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CNN3Q15417 329 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PRAMEF9Q5VWM5 478 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ERN2Q76MJ5 926 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 VRK2Q86Y07 508 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 HSD17B11Q8NBQ5 300 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM255BQ8WV15 326 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 JSRP1Q96MG2 331 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 IGKV6-21A0A0C4DH24 114 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 FAM171A2A8MVW0 826 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TARM1B6A8C7 271 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CRYBA1P05813 215 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 SHC2P98077 582 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 THEM4Q5T1C6 240 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 FAAP20Q6NZ36 180 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF383Q8NA42 475 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 FBLIM1Q8WUP2 373 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 SERINC2Q96SA4 455 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 NMES1Q9C002 83 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 EMC9Q9Y3B6 208 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CD37P11049 281 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 EDN3P14138 238 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ELAVL3Q14576 367 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GABRG1Q8N1C3 465 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PLPP7Q8NBV4 271 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 UHRF2Q96PU4 802 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 OR5H15A6NDH6 313 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 OR5H1A6NKK0 313 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 HMGN4O00479 90 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CNOT4O95628 575 aaKnown RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 FBXO45P0C2W1 286 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PGCP20142 388 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 THBS3P49746 956 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 GSK3AP49840 483 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 SCGB2A2Q13296 93 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms