RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PITPNAQ00169 270 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 ECH1Q13011 328 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 RPL13AP3Q6NVV1 102 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FAM98AQ8NCA5 519 aaKnown RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 BEST4Q8NFU0 473 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 METTL21AQ8WXB1 218 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 ADAM19Q9H013 955 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 RERGLQ9H628 205 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 BARX1Q9HBU1 254 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 MGAT4CQ9UBM8 478 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FBXL4Q9UKA2 621 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FBXL3Q9UKT7 428 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 RAB19A4D1S5 217 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 ARGFXA6NJG6 315 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 J3QRE1 110 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 GABRPO00591 440 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 UBE2CO00762 179 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FLRT2O43155 660 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 HCRTR2O43614 444 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 NCR1O76036 304 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 IFNGR1P15260 489 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 HTR1FP30939 366 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 SRP9P49458 86 aaKnown RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 RPS4XP62701 263 aaKnown RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 SNTB1Q13884 538 aaKnown RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 C10orf91Q5T1B1 145 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FAM69AQ5T7M9 428 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 OR2G6Q5TZ20 316 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 LDLRAD3Q86YD5 345 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 OR6V1Q8N148 313 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 SIRT6Q8N6T7 355 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 GATAD2BQ8WXI9 593 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 CHRNA9Q9UGM1 479 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 ACACBO00763 2458 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 C5orf52A6NGY3 159 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-201ENST00000317677 KLF7O75840 302 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SERPINA3P01011 423 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 EIF4EP06730 217 aaKnown RBP11.75□□□□□ -0.53
CPNE1-201ENST00000317677 CLUP10909 449 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SLC2A5P22732 501 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 TACR3P29371 465 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 CCKBRP32239 447 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SLC1A3P43003 542 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SNTB2Q13425 540 aaKnown RBP11.75□□□□□ -0.53
CPNE1-201ENST00000317677 CRMP1Q14194 572 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 PCOLCEQ15113 449 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM255AQ5JRV8 349 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 ELFN2Q5R3F8 820 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SLC16A13Q7RTY0 426 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SPAG16Q8N0X2 631 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 ZNF565Q8N9K5 539 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 DEFB124Q8NES8 71 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 HAVCR2Q8TDQ0 301 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 LPAR4Q99677 370 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
CPNE1-201ENST00000317677 PIGMQ9H3S5 423 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 WDR54Q9H977 334 aa11.75□□□□□ -0.53
CPNE1-201ENST00000317677 SNRPGP15A8MWD9 76 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 IMPA2O14732 288 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 CTDSPLO15194 276 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 LRRTM2O43300 516 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 EIF4E2O60573 245 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 UBL3O95164 117 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 IGHA1P01876 353 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 CRYBA1P05813 215 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 CELA2AP08217 269 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 PNMTP11086 282 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 SLC6A6P31641 620 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 THBS2P35442 1172 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 CCR6P51684 374 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 KLF9Q13886 244 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 ZNF74Q16587 644 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 EIF2S3LQ2VIR3 472 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 BAIAP2L2Q6UXY1 529 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 Q6ZTK2 550 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 LRRC75AQ8NAA5 344 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 CYB561A3Q8NBI2 242 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 RNF138Q8WVD3 245 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 MR1Q95460 341 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 KTI12Q96EK9 354 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 LRFN5Q96NI6 719 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 CCNL2Q96S94 520 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 UTP23Q9BRU9 249 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 TEX12Q9BXU0 123 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 ULBP3Q9BZM4 244 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 C20orf85Q9H1P6 137 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 ZFP57Q9NU63 452 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 RASL12Q9NYN1 266 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 TAS2R3Q9NYW6 316 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms