RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 EXT1Q16394 746 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ACKR1Q16570 336 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 C1orf140Q5VVS0 124 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 FAM180AQ6UWF9 173 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 LRRN1Q6UXK5 716 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 OR5AS1Q8N127 324 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 PLPP5Q8NEB5 264 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 NFAM1Q8NET5 270 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 OR8D4Q8NGM9 314 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 AKR7LQ8NHP1 331 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 MCFD2Q8NI22 146 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 RFT1Q96AA3 541 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CTHRC1Q96CG8 243 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SECISBP2Q96T21 854 aaKnown RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 DHRS9Q9BPW9 319 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 GON7Q9BXV9 100 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 HDHD5Q9BXW7 423 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 FGF20Q9NP95 211 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 ZNF275Q9NSD4 429 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 STAB1Q9NY15 2570 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 IGKV3D-11A0A0A0MRZ8 115 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 KLRC4-KLRK1H3BQV0 150 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 BET1O15155 118 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SP1P08047 785 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CELP19835 753 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SLC6A1P30531 599 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CD79BP40259 229 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SLC6A8P48029 635 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 IDH3GP51553 393 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 ZNF136P52737 540 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 PLAURQ03405 335 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 FOXF2Q12947 444 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ILKQ13418 452 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CBFBQ13951 182 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 PDCD1Q15116 288 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SLC36A2Q495M3 483 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ADGRG3Q86Y34 549 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 KIF18BQ86Y91 864 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 RFLNBQ8N5W9 214 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 LSMEM1Q8N8F7 131 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ASCC1Q8N9N2 400 aaKnown RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 OR2M7Q8NG81 312 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 OR13C5Q8NGS8 318 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 LILRB1Q8NHL6 650 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 C1GALT1C1Q96EU7 318 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SCMH1Q96GD3 660 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 KLHL15Q96M94 604 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ATF6BQ99941 703 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 PITHD1Q9GZP4 211 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 C11orf54Q9H0W9 315 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 NIPAL2Q9H841 368 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CRLF2Q9HC73 371 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SMURF1Q9HCE7 757 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ZNF69Q9UC07 566 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 GNG8Q9UK08 70 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 COA3Q9Y2R0 106 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 PCDHGA9Q9Y5G4 932 aaKnown RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 MED12LQ86YW9 2145 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 FITM1A5D6W6 292 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 A8MV72 311 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 CDK2AP1O14519 115 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 TOX3O15405 576 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 LYPD3O95274 346 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 LALBAP00709 142 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 TSPAN19P0C672 248 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 RAC2P15153 192 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ACAA2P42765 397 aaKnown RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 CDH11P55287 796 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 MLF1P58340 268 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CLRN1P58418 232 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 LTBQ06643 244 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 RASGEF1BQ0VAM2 473 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 MLLT11Q13015 90 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 TPBGQ13641 420 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 FHL5Q5TD97 284 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 ULK3Q6PHR2 472 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CXorf67Q86X51 503 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 WFDC8Q8IUA0 241 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SLC30A8Q8IWU4 369 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 IZUMO1Q8IYV9 350 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 OR5W2Q8NH69 310 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 SNX33Q8WV41 574 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 COPS4Q9BT78 406 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 RNF32Q9H0A6 362 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 UCK1Q9HA47 277 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 DIMT1Q9UNQ2 313 aaKnown RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 PEX16Q9Y5Y5 336 aa4.41□□□□□ -1.7
CAST-201ENST00000309190 CHCHD2Q9Y6H1 151 aaPredicted RBP4.41□□□□□ -1.7
CAST-201ENST00000309190 OR6C65A6NJZ3 312 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 RIIAD1A6NNX1 92 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 LOC110117498-PIK3R3F6TDL0 507 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 ACOT7O00154 380 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 IL1AP01583 271 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 DBHP09172 617 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 OR8G3PP0DMU2 310 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 DBTP11182 482 aaKnown RBP4.4□□□□□ -1.7
CAST-201ENST00000309190 FXYD6P3P58550 94 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 ST3GAL4Q11206 333 aa4.4□□□□□ -1.7
CAST-201ENST00000309190 HIKESHIQ53FT3 197 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms