RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 BADQ92934 168 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 LRFN5Q96NI6 719 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 OR2M4Q96R27 311 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 STACQ99469 402 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 MRM2Q9UI43 246 aaKnown RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 KCNG2Q9UJ96 466 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 CES1P1Q9UKY3 287 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 TMEM127O75204 238 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 GPANK1O95872 356 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 ADRA2CP18825 462 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 CDKN2AP42771 156 aaKnown RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 GUCA1AP43080 201 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 CLDN6P56747 220 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 PLA2G7Q13093 441 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 IL10RAQ13651 578 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 C14orf28Q4W4Y0 310 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 FJX1Q86VR8 437 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 ST7LQ8TDW4 575 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 SFXN1Q9H9B4 322 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 C14orf166Q9Y224 244 aaKnown RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 OR6C76A6NM76 312 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 MPIG6BO95866 241 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 HCKP08631 526 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 NPY4RP50391 375 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 USP53Q70EK8 1073 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 SKA3Q8IX90 412 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 ETFBKMTQ8IXQ9 262 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 ZNF561Q8N587 486 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 NPEPL1Q8NDH3 523 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 OR4K15Q8NH41 348 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 FGF13Q92913 245 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 TAF9BQ9HBM6 251 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 HRASLS2Q9NWW9 162 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 KNTC1P50748 2209 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 DNAH12Q6ZR08 3092 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 IGKV1-8A0A0C4DH67 115 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 RHPN2P1A8MT19 583 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 PRKNO60260 465 aaPredicted RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 H2BFMP0C1H6 154 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 RGS19P49795 217 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 ELAVL1Q15717 326 aaKnown RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 RNF212Q495C1 297 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 TTLL10Q6ZVT0 673 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 TIMP4Q99727 224 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 RSRP1Q9BUV0 290 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 CHRDQ9H2X0 955 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 TMEM272A0A1B0GTI8 110 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 NUDT19A8MXV4 375 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 FOSL1P15407 271 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 ZIC1Q15915 447 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 VWA2Q5GFL6 755 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 OR13C9Q8NGT0 318 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 OR5H2Q8NGV7 314 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 MARCH1Q8TCQ1 289 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 DMRTA2Q96SC8 542 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 SEMA6CQ9H3T2 930 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 FN3KRPQ9HA64 309 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 H0YGG7 62 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 SMIM6P0DI80 62 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 HRH1P35367 487 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 ARF3P61204 181 aaPredicted RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 DEFB103AP81534 67 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 FAM109BQ6ICB4 259 aaPredicted RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 SLC25A24Q6NUK1 477 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 EDAQ92838 391 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 ISOC2Q96AB3 205 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 ST6GALNAC5Q9BVH7 336 aa11.82□□□□□ -0.52
TRIM35-201ENST00000305364 EXOSC3Q9NQT5 275 aaKnown RBP11.82□□□□□ -0.52
TRIM35-201ENST00000305364 ITGA5P08648 1049 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 PNMTP11086 282 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ABCD3P28288 659 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 GLP1RP43220 463 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ERV3-1Q14264 604 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 RHEBQ15382 184 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 CST6Q15828 149 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 NKAIN2Q5VXU1 208 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 UNQ9370/PRO34162Q6UXP9 181 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 C12orf76Q8N812 135 aaPredicted RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TSACCQ96A04 125 aaPredicted RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 FAM83CQ9BQN1 747 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 EMC9Q9Y3B6 208 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 PUS1Q9Y606 427 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ASXL3Q9C0F0 2248 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 HEATR5BQ9P2D3 2071 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 A0A087WV48 116 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SERINC4A6NH21 518 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 LRP3O75074 770 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SGCAQ16586 387 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms