RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FKRPQ9H9S5 495 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CMC2Q9NRP2 79 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ACER3Q9NUN7 267 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ZFP92A6NM28 416 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 M0QYG6 137 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 AQP8O94778 261 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TOX4O94842 621 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CYC1P08574 325 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 PAX6P26367 422 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 EVX1P49640 407 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 PFN3P60673 137 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 BAMBIQ13145 260 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 RTL8BQ17RB0 113 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 PNPLA1Q8N8W4 532 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 HPSE2Q8WWQ2 592 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ACTR3CQ9C0K3 210 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TM7SF3Q9NS93 570 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CLEC2DQ9UHP7 191 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 VAMP5O95183 116 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 KIR2DL3P43628 341 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 RPL27P61353 136 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ACVR1Q04771 509 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 RBPJQ06330 500 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM176BQ3YBM2 270 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 FAHD1Q6P587 224 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF680Q8NEM1 530 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 YTHDF2Q9Y5A9 579 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 HEMK1Q9Y5R4 338 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 GPR171O14626 319 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TRAF3IP2O43734 574 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PCSK6P29122 969 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 NKX2-1P43699 371 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 UBE2G1P62253 170 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 Q6ZPB1 254 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 LYG2Q86SG7 212 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SMIM4Q8WVI0 70 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 NKX2-4Q9H2Z4 354 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TAS2R5Q9NYW4 299 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CCDC85CA6NKD9 419 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TIMM8AO60220 97 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CEBPBP17676 345 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 MAKP20794 623 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ACKR3P25106 362 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 DCDP81605 110 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SYT13Q7L8C5 426 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CAMKMTQ7Z624 323 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CDC20BQ86Y33 519 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 OR2AE1Q8NHA4 323 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PRICKLE3O43900 615 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 NXPH2O95156 264 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CT45A10P0DMU9 189 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 P2RX1P51575 399 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 RAG2P55895 527 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TBPL2Q6SJ96 375 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SLC39A5Q6ZMH5 540 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PPP1R3BQ86XI6 285 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 FUNDC1Q8IVP5 155 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 HSD17B11Q8NBQ5 300 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CPEB3Q8NE35 698 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ZIC5Q96T25 663 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SCN2AQ99250 2005 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 H3BNC9 293 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TRIM77I1YAP6 450 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TPPPO94811 219 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ABHD16AO95870 558 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SDHAP31040 664 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CSN1S1P47710 185 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 DUSP8Q13202 625 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SYT9Q86SS6 491 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 RIMKLAQ8IXN7 391 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PHOSPHO2Q8TCD6 241 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 FYTTD1Q96QD9 318 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 C12orf57Q99622 126 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ZDHHC5Q9C0B5 715 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CHST11Q9NPF2 352 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SLC35D1Q9NTN3 355 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SSUH2Q9Y2M2 353 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PTRH2Q9Y3E5 179 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PATJQ8NI35 1801 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TCRBV5S1A1TA0A578 114 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TCRBV5S2A0A599 114 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 HMGN4O00479 90 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SELENOFO60613 162 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 EIF4EP06730 217 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ITGB8P26012 769 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 FABP6P51161 128 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CLDN12P56749 244 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SCAND1P57086 179 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 EEF1A2Q05639 463 aaKnown RBP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SLC39A11Q8N1S5 342 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM217Q8N7C4 229 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PHYHIPLQ96FC7 376 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 PDXPQ96GD0 296 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 BARHL1Q9BZE3 327 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 MMP26Q9NRE1 261 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 ZBTB42B2RXF5 422 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms