RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 OR10H1Q9Y4A9 318 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 HS3ST3A1Q9Y663 406 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 SCN2AQ99250 2005 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 A6NJ64 397 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 TGFBR3LH3BV60 316 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 RDH16O75452 317 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 CTAG2O75638 210 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 CLPSP04118 112 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 OR4E1P0C645 316 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 SKP2Q13309 424 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 RAB12Q6IQ22 244 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 LIN54Q6MZP7 749 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 H3F3CQ6NXT2 135 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 ZNF600Q6ZNG1 722 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 LSRQ86X29 649 aaPredicted RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 ZNF614Q8N883 585 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 ZNF615Q8N8J6 731 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 ZSCAN1Q8NBB4 408 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 OR5M8Q8NGP6 311 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 OR10G6Q8NH81 332 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 DOK4Q8TEW6 326 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 C2CD4CQ8TF44 421 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 Q96M85 177 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 NECAB3Q96P71 396 aaPredicted RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 ADAT1Q9BUB4 502 aaKnown RBP9.37□□□□□ -0.91
SKA1-201ENST00000285116 CPAMD8Q8IZJ3 1885 aa9.37□□□□□ -0.91
SKA1-201ENST00000285116 TRAV20A0A0B4J274 112 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 A0A1B0GTI1 187 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ELOA3DA6NLF2 546 aaPredicted RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 FGF16O43320 207 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 DOK2O60496 412 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 SRPX2O60687 465 aaPredicted RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 ANXA2P07355 339 aaKnown RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 OR8G3PP0DMU2 310 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 GDI1P31150 447 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ELOA3BQ3SY89 546 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ALG10Q5BKT4 473 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ZNF813Q6ZN06 617 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ELOA3Q8NG57 546 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ELP5Q8TE02 316 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ASB17Q8WXJ9 295 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 TSACCQ96A04 125 aaPredicted RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 C4orf45Q96LM5 186 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ADAD1Q96M93 576 aaKnown RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 ZNF285Q96NJ3 590 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 PTDSS2Q9BVG9 487 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 SLCO5A1Q9H2Y9 848 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 PRODH2Q9UF12 536 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ZNF230Q9UIE0 474 aaPredicted RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 DTX4Q9Y2E6 619 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 TMEM82A0PJX8 343 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 TMEM72A0PK05 275 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 RNF222A6NCQ9 220 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 SYNDIG1LA6NDD5 238 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 SLC17A2O00624 439 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 FSTP19883 344 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 DLSTP36957 453 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 MAGEB1P43366 347 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 AKR1C2P52895 323 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 AKR1C1Q04828 323 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 VWA2Q5GFL6 755 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 STEAP1BQ6NZ63 245 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 TMPRSS12Q86WS5 348 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 SHISA5Q8N114 240 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 CLEC1AQ8NC01 280 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 RXFP4Q8TDU9 374 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 GPX8Q8TED1 209 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 ARL11Q969Q4 196 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 CRB3Q9BUF7 120 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 FKRPQ9H9S5 495 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 GSN-AS1Q9NRJ2 163 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 LRIT1Q9P2V4 623 aa9.36□□□□□ -0.91
SKA1-201ENST00000285116 TP53BP1Q12888 1972 aaPredicted RBP9.36□□□□□ -0.91
SKA1-201ENST00000285116 TRAV8-7A0A075B6U6 113 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 LOC100289279A0A1B0GTE1 492 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 MEX3AA1L020 520 aaKnown RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 CDC40O60508 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
SKA1-201ENST00000285116 IL33O95760 270 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 PVRP15151 417 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 COL9A1P20849 921 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 MPZP25189 248 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 AQP2P41181 271 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ACTBP60709 375 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 RAB5BP61020 215 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ACTG1P63261 375 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ROM1Q03395 351 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 PDZK1IP1Q13113 114 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TEX30Q5JUR7 227 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ZNF704Q6ZNC4 412 aaPredicted RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 PRSS35Q8N3Z0 413 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ZNF511Q8NB15 262 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TMEM229BQ8NBD8 167 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 OR4C3Q8NH37 302 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms