RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 EDN3P14138 238 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 FOLR1P15328 257 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 AAED1Q7RTV5 226 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 PPP1R3BQ86XI6 285 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 MRPL38Q96DV4 380 aaKnown RBP15.07■□□□□ 0
SH3RF1-201ENST00000284637 MYEOVQ96EZ4 313 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 EXO1Q9UQ84 846 aaKnown RBP15.07■□□□□ 0
SH3RF1-201ENST00000284637 NSG1A0A0A6YYJ2 146 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 RPS27P42677 84 aaKnown RBP15.07■□□□□ 0
SH3RF1-201ENST00000284637 TNFRSF4P43489 277 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 LYPD8Q6UX82 237 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 FAM71CQ8NEG0 241 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 TXN2Q99757 166 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 CD207Q9UJ71 328 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 ARID1AO14497 2285 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 INHBBP09529 407 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 HOXC8P31273 242 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 TRHRP34981 398 aaPredicted RBP15.07■□□□□ 0
SH3RF1-201ENST00000284637 TSFMP43897 325 aaKnown RBP15.07■□□□□ 0
SH3RF1-201ENST00000284637 DUSP18Q8NEJ0 188 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 SLC46A1Q96NT5 459 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 TAS2R4Q9NYW5 299 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 PRAMEF4O60810 478 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CLDN1O95832 211 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 IGLV3-25P01717 112 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CALCRP30988 508 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 TGFBR3Q03167 851 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 FABP9Q0Z7S8 132 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CYHR1Q6ZMK1 362 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 RTN4RL1Q86UN2 441 aaPredicted RBP15.06■□□□□ 0
SH3RF1-201ENST00000284637 ADIPOR2Q86V24 386 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 OR5L1Q8NGL2 311 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 USB1Q9BQ65 265 aaKnown RBP15.06■□□□□ 0
SH3RF1-201ENST00000284637 PIGQQ9BRB3 760 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 MBNL1Q9NR56 388 aaKnown RBP15.06■□□□□ 0
SH3RF1-201ENST00000284637 NXT1Q9UKK6 140 aaKnown RBP15.06■□□□□ 0
SH3RF1-201ENST00000284637 A8MVM7 634 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 TAAR5O14804 337 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 DSCR3O14972 297 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 ABLIM3O94929 683 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CALCBP10092 127 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 HOXA9P31269 272 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 C5orf46Q6UWT4 87 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 RBMS3Q6XE24 437 aaKnown RBP15.06■□□□□ 0
SH3RF1-201ENST00000284637 WDR5BQ86VZ2 330 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CMTM4Q8IZR5 234 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 SLC6A18Q96N87 628 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 SUCNR1Q9BXA5 334 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 DUSP22Q9NRW4 184 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 TMEM235A6NFC5 223 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CD63P08962 238 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 G0S2P27469 103 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 IFITM3Q01628 133 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 BDH1Q02338 343 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 C17orf67Q0P5P2 114 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CSAG2Q9Y5P2 127 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 MDFIC2A0A1B0GVS7 189 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 SCGB2A1O75556 95 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 ACHEP22303 614 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 C1orf140Q5VVS0 124 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 TMEM71Q6P5X7 295 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 CNEP1R1Q8N9A8 125 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 ANKRD9Q96BM1 317 aaPredicted RBP15.06■□□□□ 0
SH3RF1-201ENST00000284637 ORAI1Q96D31 301 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 ATF6BQ99941 703 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 ARHGAP9Q9BRR9 750 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 HDAC8Q9BY41 377 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 DAPP1Q9UN19 280 aa15.06■□□□□ 0
SH3RF1-201ENST00000284637 YPEL5P62699 121 aa15.05■□□□□ 0
SH3RF1-201ENST00000284637 ZNF266Q14584 549 aa15.05■□□□□ 0
SH3RF1-201ENST00000284637 GLYR1Q49A26 553 aaPredicted RBP15.05■□□□□ 0
SH3RF1-201ENST00000284637 EXOSC3Q9NQT5 275 aaKnown RBP15.05■□□□□ 0
SH3RF1-201ENST00000284637 DLL4Q9NR61 685 aa15.05■□□□□ 0
SH3RF1-201ENST00000284637 POM121BA6NF01 834 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 OR6C76A6NM76 312 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 DCTN6O00399 190 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 MT-ND4LP03901 98 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 HBG1P69891 147 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 HBG2P69892 147 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 AFMIDQ63HM1 303 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 BPIFCQ8NFQ6 507 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 ABHD6Q9BV23 337 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 EMC6Q9BV81 110 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 AUNIPQ9H7T9 357 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 SCRG1O75711 98 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 GABRA2P47869 451 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 FAM27D1Q5T7N8 215 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 CD300LGQ6UXG3 332 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 CLEC1AQ8NC01 280 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 SFT2D1Q8WV19 159 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 NXPE3Q969Y0 559 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 STACQ99469 402 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 ISG20L2Q9H9L3 353 aaKnown RBP15.05■□□□□ -0
SH3RF1-201ENST00000284637 GAB2Q9UQC2 676 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.05■□□□□ -0
SH3RF1-201ENST00000284637 ZFP92A6NM28 416 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 GATCO43716 136 aaKnown RBP15.05■□□□□ -0
SH3RF1-201ENST00000284637 ADIRFQ15847 76 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 BRICD5Q6PL45 260 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 DMBX1Q8NFW5 382 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms