RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 WNT11O96014 354 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 SFTPBP07988 381 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 FBP1P09467 338 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 OR8U9P0C7N5 309 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 MAPK3P27361 379 aaPredicted RBP11.62□□□□□ -0.55
HERC6-202ENST00000273960 S100A2P29034 98 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 DCDP81605 110 aaKnown RBP11.62□□□□□ -0.55
HERC6-202ENST00000273960 PYY3Q5JQD4 70 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 TMEM240Q5SV17 173 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 AMZ2Q86W34 360 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 LINC01555Q8NAE3 123 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 OR8U1Q8NH10 309 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 OR51F2Q8NH61 342 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 RXFP3Q9NSD7 469 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 OR1A2Q9Y585 309 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
HERC6-202ENST00000273960 TRIOBPQ9H2D6 2365 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 MPDZO75970 2070 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 SNRNP200O75643 2136 aaKnown RBP11.62□□□□□ -0.55
HERC6-202ENST00000273960 MRPS10P82664 201 aaKnown RBP11.62□□□□□ -0.55
HERC6-202ENST00000273960 GLYATL3Q5SZD4 288 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 RPL7L1Q6DKI1 246 aaKnown RBP11.62□□□□□ -0.55
HERC6-202ENST00000273960 STX12Q86Y82 276 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 ZNF565Q8N9K5 539 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 CLEC1AQ8NC01 280 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 SLC25A43Q8WUT9 341 aaPredicted RBP11.62□□□□□ -0.55
HERC6-202ENST00000273960 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 NRSN2Q9GZP1 204 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 SMOC1Q9H4F8 434 aa11.62□□□□□ -0.55
HERC6-202ENST00000273960 MDC1Q14676 2089 aaKnown RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 IFNA2P01563 188 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 ACKR3P25106 362 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 FCRL6Q6DN72 434 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 CSNK1A1LQ8N752 337 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 GAL3ST3Q96A11 431 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 MMP26Q9NRE1 261 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 TAS2R8Q9NYW2 309 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 EPHA6Q9UF33 1036 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 CARHSP1Q9Y2V2 147 aaKnown RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 COL4A4P53420 1690 aaPredicted RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 FRKP42685 505 aaPredicted RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 ARHGAP11AQ6P4F7 1023 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 EID2Q8N6I1 236 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 ZSCAN4Q8NAM6 433 aaPredicted RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 METTL8Q9H825 291 aaKnown RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 OR5AC2Q9NZP5 309 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 FBXO7Q9Y3I1 522 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 SEC16AO15027 2179 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 LILRB3O75022 631 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 HOXB5P09067 269 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 NR2C1P13056 603 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 PSMB6P28072 239 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 P2RY4P51582 365 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 MPPED2Q15777 294 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 RAB11BQ15907 218 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 RNASE10Q5GAN6 216 aaKnown RBP11.61□□□□□ -0.55
HERC6-202ENST00000273960 FAM78AQ5JUQ0 283 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 TMEM31Q5JXX7 168 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 C9orf50Q5SZB4 431 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 GFI1BQ5VTD9 330 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 PARGQ86W56 976 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 ZNF584Q8IVC4 421 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 POMGNT2Q8NAT1 580 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 OR5T3Q8NGG3 340 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 ZNF563Q8TA94 476 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 NUS1Q96E22 293 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 KIRREL1Q96J84 757 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 TMEM74BQ9NUR3 256 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 FLRT3Q9NZU0 649 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 LAMP5Q9UJQ1 280 aa11.61□□□□□ -0.55
HERC6-202ENST00000273960 ZNF729A6NN14 1252 aaPredicted RBP11.6□□□□□ -0.55
HERC6-202ENST00000273960 PRNPP04156 253 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 CALCBP10092 127 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 RAB5AP20339 215 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 TAS2R19P59542 299 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 ZNF813Q6ZN06 617 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 Q6ZRG5 221 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 RSPRY1Q96DX4 576 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 RAB3CQ96E17 227 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 SEH1LQ96EE3 360 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 PHB2Q99623 299 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 CFHR5Q9BXR6 569 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 WDR76Q9H967 626 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 A0A1W2PPC1 479 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 ZNF727A8MUV8 499 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 AP4M1O00189 453 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 SOX15O60248 233 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 MOSPD3O75425 235 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 SLC35G4P0C7Q5 338 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 MAP3K8P41279 467 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 FHITP49789 147 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 ILF3Q12906 894 aaKnown RBP eCLIP11.6□□□□□ -0.55
HERC6-202ENST00000273960 MST1LQ2TV78 715 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 SKA3Q8IX90 412 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 OR14C36Q8NHC7 312 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 FAM174AQ8TBP5 190 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms