RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 C9orf170A2RU37 121 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 POM121BA6NF01 834 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 CD14P08571 375 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 SFTPCP11686 197 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF44P15621 663 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 PAX6P26367 422 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 PSMB6P28072 239 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 IL13RA1P78552 427 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 DEFA6Q01524 100 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 SP3Q02447 781 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 ELOCQ15369 112 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 PNLIPRP3Q17RR3 467 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 FAM76BQ5HYJ3 339 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 DPY19L4Q7Z388 723 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 RAB7BQ96AH8 199 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 CST11Q9H112 138 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 HRH4Q9H3N8 390 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
XRCC1-201ENST00000262887 SLC27A6Q9Y2P4 619 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 DMRT1Q9Y5R6 373 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 MYO7AQ13402 2215 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 A0A1B0GV90 55 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 DCTN6O00399 190 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 NKX2-2O95096 273 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 IL2RAP01589 272 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 CD63P08962 238 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 SFTA3P0C7M3 94 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 PPICP45877 212 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 SLC25A1P53007 311 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 RPS4XP62701 263 aaKnown RBP13.52□□□□□ -0.24
XRCC1-201ENST00000262887 SKP1P63208 163 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 ADAM8P78325 824 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 DRAM2Q6UX65 266 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 RNF44Q7L0R7 432 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 CD163Q86VB7 1156 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 SFTPA1Q8IWL2 248 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 TMEM52Q8NDY8 209 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 OR4N2Q8NGD1 307 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 SEC61A2Q9H9S3 476 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 CYTL1Q9NRR1 136 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.52□□□□□ -0.24
XRCC1-201ENST00000262887 LPAR3Q9UBY5 353 aa13.52□□□□□ -0.24
XRCC1-201ENST00000262887 H7C1C5 153 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 EIF1AYO14602 144 aaKnown RBP13.52□□□□□ -0.25
XRCC1-201ENST00000262887 TXNL1O43396 289 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 CRHP06850 196 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 EIF1AXP47813 144 aaKnown RBP13.52□□□□□ -0.25
XRCC1-201ENST00000262887 CAV2P51636 162 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 LCN6P62502 163 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 C10orf53Q8N6V4 93 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 OR52R1Q8NGF1 315 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 CASTOR1Q8WTX7 329 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 LCN9Q8WX39 176 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 GPX7Q96SL4 187 aaPredicted RBP13.52□□□□□ -0.25
XRCC1-201ENST00000262887 HDAC8Q9BY41 377 aa13.52□□□□□ -0.25
XRCC1-201ENST00000262887 PHPT1Q9NRX4 125 aaPredicted RBP13.52□□□□□ -0.25
XRCC1-201ENST00000262887 C5orf51A6NDU8 294 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 URADA6NGE7 173 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 ZNF10P21506 573 aaPredicted RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 GRK6P43250 576 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 KIR3DL2P43630 455 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 RIDAP52758 137 aaKnown RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 FABP9Q0Z7S8 132 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 KLHL26Q53HC5 615 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 WDR38Q5JTN6 314 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 FAM166AQ6J272 317 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 ZNF561Q8N587 486 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 ZNF296Q8WUU4 475 aaPredicted RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 NUDCD2Q8WVJ2 157 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 SLC41A2Q96JW4 573 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 C4orf45Q96LM5 186 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 PRRT1Q99946 306 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 WDR76Q9H967 626 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 ZNF107Q9UII5 783 aaPredicted RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 GTF2A1LQ9UNN4 478 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 TBC1D3IA0A087WXS9 549 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 RNASEK-C17orf49H0YIS7 233 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 GPR75O95800 540 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 ADH1CP00326 375 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 IGKV1D-16P01601 117 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 RD3LP0DJH9 198 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 SMIM10L1P0DMW3 83 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 APEHP13798 732 aaKnown RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 VAMP1P23763 118 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 F2RL1P55085 397 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 CTXN1P60606 82 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 DMWDQ09019 674 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 MEF2DQ14814 521 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 AKIRIN2Q53H80 203 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 FBXO42Q6P3S6 717 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 PAPD4Q6PIY7 484 aaKnown RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 ZNF584Q8IVC4 421 aa13.51□□□□□ -0.25
XRCC1-201ENST00000262887 DMRTC2Q8IXT2 367 aaPredicted RBP13.51□□□□□ -0.25
XRCC1-201ENST00000262887 EXD3Q8N9H8 876 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms