RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 C17orf67Q0P5P2 114 aa13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 CD276Q5ZPR3 534 aa13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 PYHIN1Q6K0P9 492 aa13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 KMT5CQ86Y97 462 aa13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 TRAF4Q9BUZ4 470 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 ZNF69Q9UC07 566 aa13.15□□□□□ -0.3
TRAFD1-201ENST00000257604 DMXL1Q9Y485 3027 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 TRABD2BA6NFA1 517 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 D6RAR5 112 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ARL6IP5O75915 188 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 INSM1Q01101 510 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 B3GNTL1Q67FW5 361 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 RPL22L1Q6P5R6 122 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 OR2M2Q96R28 347 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 PTDSS2Q9BVG9 487 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC19A3Q9BZV2 496 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 INPP5EQ9NRR6 644 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 IGKV1D-43A0A0B4J1Z2 117 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 C9J4A7 227 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 PIN1P1O15428 100 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ANXA2P07355 339 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF823P16415 610 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 LCN1P31025 176 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 PRKXP51817 358 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 TAGLNQ01995 201 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 RAET1LQ5VY80 246 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC51BQ86UW2 128 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 RASL10BQ96S79 203 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 CA10Q9NS85 328 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 EIF4E2O60573 245 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 KDM4BO94953 1096 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 TACSTD2P09758 323 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 RAD52P43351 418 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC16A9Q7RTY1 509 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 PLPP7Q8NBV4 271 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 KLHL15Q96M94 604 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF281Q9Y2X9 895 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF407Q9C0G0 2248 aa13.14□□□□□ -0.31
TRAFD1-201ENST00000257604 DCDC2BA2VCK2 349 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 RAMP1O60894 148 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 PLATP00750 562 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 TCN2P20062 427 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 RSPO4Q2I0M5 234 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 OR5L2Q8NGL0 311 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 RBPMSQ93062 196 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 LIN7BQ9HAP6 207 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 HAO2Q9NYQ3 351 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 CUL9Q8IWT3 2517 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 TMEM200CA6NKL6 621 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 EPXP11678 715 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 GALNSP34059 522 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 GDNFP39905 211 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 RPS11P62280 158 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 EEF1A1P5Q5VTE0 462 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 LRRC75AQ8NAA5 344 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 ADAMTS14Q8WXS8 1223 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 RGP1Q92546 391 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF436Q9C0F3 470 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 ZMAT3Q9HA38 289 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 MGAT4CQ9UBM8 478 aa13.13□□□□□ -0.31
TRAFD1-201ENST00000257604 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 TRAV8-7A0A075B6U6 113 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 MEIKINA0A087WXM9 373 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 ARPC5O15511 151 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 SERPINA3P01011 423 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 TUSC1Q2TAM9 212 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 IGSF11Q5DX21 431 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 STPG1Q5TH74 334 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 NFAM1Q8NET5 270 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 GSX2Q9BZM3 304 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 MAB21L2Q9Y586 359 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 G3V3Q6 166 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 PLPP3O14495 311 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 ACSM4P0C7M7 580 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 SULT1A3P0DMM9 295 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 SULT1A4P0DMN0 295 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 TMIGD3P0DMS9 266 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 RRASP10301 218 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 PLA2G7Q13093 441 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 MYBPHQ13203 477 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms