RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SELENOPP49908 381 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 ZNF829Q3KNS6 432 aaPredicted RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 ACSM3Q53FZ2 586 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 LRRN1Q6UXK5 716 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 OR2AJ1Q8NGZ0 328 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 OR2G2Q8NGZ5 317 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 OR5AK2Q8NH90 309 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 ZNF845Q96IR2 970 aaPredicted RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 DCLRE1CQ96SD1 692 aaKnown RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 ULBP2Q9BZM5 246 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 NIPAL2Q9H841 368 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 BCO1Q9HAY6 547 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 PLGRKTQ9HBL7 147 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 SNTG1Q9NSN8 517 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 PARPBPQ9NWS1 579 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 UGT2A1Q9Y4X1 527 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 PTPRZ1P23471 2315 aaPredicted RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 CLDN25C9JDP6 229 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 PSMD9O00233 223 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 UCHL1P09936 223 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 NPR2P20594 1047 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 MSR1P21757 451 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 RPS11P62280 158 aaKnown RBP eCLIP12.56□□□□□ -0.4
SDF2-201ENST00000247020 DCTN2Q13561 401 aaKnown RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZNF169Q14929 603 aaPredicted RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 INAQ16352 499 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZMAT1Q5H9K5 638 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 RNFT1Q5M7Z0 435 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 LRRC69Q6ZNQ3 347 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 CEACAM19Q7Z692 300 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 CPT1CQ8TCG5 803 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 WDYHV1Q96HA8 205 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 C4orf45Q96LM5 186 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 PRDM14Q9GZV8 571 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 DEFB127Q9H1M4 99 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 CCDC86Q9H6F5 360 aaKnown RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 EXO5Q9H790 373 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 SEC61A2Q9H9S3 476 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 PALMDQ9NP74 551 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 AKIP1Q9NQ31 210 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 FRRS1LQ9P0K9 344 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 ING1Q9UK53 422 aaPredicted RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZNF175Q9Y473 711 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 LRP12Q9Y561 859 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 LIPGQ9Y5X9 500 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 OR4C45A6NMZ5 311 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZNF879B4DU55 563 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZNF878C9JN71 531 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 TMEM127O75204 238 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 RPP14O95059 124 aaKnown RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZFPL1O95159 310 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 ITGB2P05107 769 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 FCGR2AP12318 317 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 SPINK2P20155 84 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 EIF2S3P41091 472 aaKnown RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 OPRL1P41146 370 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 BMXP51813 675 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 MRPS34P82930 218 aaKnown RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 SRYQ05066 204 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 NRN1LQ496H8 165 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 RPUSD3Q6P087 351 aaKnown RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.56□□□□□ -0.4
SDF2-201ENST00000247020 GPR137CQ8N3F9 429 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 BORCS5Q969J3 196 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 SLAMF6Q96DU3 332 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 PDCD1LG2Q9BQ51 273 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 WACQ9BTA9 647 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 BARHL1Q9BZE3 327 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 POLR1DQ9Y2S0 133 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 LHFPL6Q9Y693 200 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 R4GMQ9 66 aa12.56□□□□□ -0.4
SDF2-201ENST00000247020 TRBV5-5A0A0J9YX44 114 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 ANKRD61A6NGH8 418 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 AQP7O14520 342 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 SRSF10O75494 262 aaKnown RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 RAF1P04049 648 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 H2BFMP0C1H6 154 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 CALRP27797 417 aaKnown RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 ETV6P41212 452 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 MMP16P51512 607 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 HNRNPA0Q13151 305 aaKnown RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 Q499Y3 187 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 PHYHD1Q5SRE7 291 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 Q6ZS92 163 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 LINC00346Q8IVM7 164 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 SPACA3Q8IXA5 215 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms