RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 RgccQ9DBX1 137 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 SrrQ9QZX7 339 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Tcrg-V3A0A0G2JEW2 117 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr740E9PV79 311 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Bmi1P25916 324 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Slc35g3Q5F297 340 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 NagpaQ8BJ48 517 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Med17Q8VCD5 649 aaKnown RBP8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr441Q8VFS5 310 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr126Q8VGF0 319 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr340Q8VGL0 312 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cd209aQ91ZX1 238 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Mrpl42Q9CPV3 142 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Kcnmb4Q9JIN6 210 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gab1Q9QYY0 695 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cldn34aG3UW52 211 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm8888J3QPX5 126 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 GamtO35969 236 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 P01669 111 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 PdxpP60487 292 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cntnap5bQ0V8T8 1292 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Tmem38aQ3TMP8 298 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Fbxw16Q497Z0 464 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Slc22a27Q76M72 551 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 SclyQ9JLI6 432 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Thsd1Q9JM61 851 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Kcnip3Q9QXT8 256 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cyp11a1Q9QZ82 526 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Chd3B1AR17 2055 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 A730046J19RikA0A1B0GSN8 89 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm21731A0A286YDE9 180 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 A0A286YDG0 184 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr1436A0PK57 315 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Kcnk15B2RVL1 343 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm10376D3YXI8 184 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm20715E9Q3L7 95 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm4181E9Q7X3 184 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 E030030I06RikJ3QML9 246 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 MbpP04370 250 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Znf703P0CL69 594 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Fut10Q5F2L2 481 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 DgkzQ80UP3 929 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gstm7Q80W21 218 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Slc30a8Q8BGG0 367 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr469Q8VF66 314 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Mrgprb5Q91ZB9 322 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Dnmt3lQ9CWR8 421 aaKnown RBP8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Slc25a27Q9D6D0 322 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 PlpbpQ9Z2Y8 274 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Arid1aA2BH40 2283 aaKnown RBP8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 CntrlA2AL36 2334 aa8.54□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr455A0A0B4J1M2 317 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm5890A0A140LI04 305 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Defa34D3Z0J0 93 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr68E9PYY2 315 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Lin7cO88952 197 aaKnown RBP8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Ifna9P09235 190 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Sap25Q1EHW4 186 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Tmem248Q3TBN1 314 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Apcdd1Q3U128 514 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cmpk2Q3U5Q7 447 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Tbccd1Q640P7 552 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Lrrtm3Q8BZ81 582 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr769Q8K501 312 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr1504Q8VFQ4 315 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Nhp2Q9CRB2 153 aaKnown RBP8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 SptbP15508 2128 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm16368A0A1Y7VNG9 144 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Fndc10A2A9Q0 223 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr1039A2ARY0 319 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm6096D3YTY6 151 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gm5519D3Z175 170 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Enpp7D3Z6V6 446 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr613E9PYB4 317 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Olfr555E9Q547 315 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Vmn2r66K7N6R9 851 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Vmn1r20K7N778 303 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Rpl13aP19253 203 aaKnown RBP8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Hoxd11P23813 323 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Tnfrsf1bP25119 474 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Gpr3P35413 330 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 NptnP97300 397 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Nxt2Q3UNA4 142 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Agfg2Q80WC7 479 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cox14Q8BH51 57 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Or51e2Q8VBV9 320 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Noxo1Q8VCM2 349 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 PccbQ99MN9 541 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cts6Q9ET52 334 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Scgb1b10A0A087WPW0 93 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Vmn2r107E9PZJ7 861 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Agpat1O35083 285 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Cdk2ap1O35207 114 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Wnt2bO70283 389 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Bmpr1aP36895 532 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Defb43Q30KM9 69 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Acsm4Q80W40 580 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Q8BTG6 205 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 4930474N05RikQ8BVR5 218 aa8.53□□□□□ -1.04
Scn8a-213ENSMUST00000201549 Vmn1r220Q8R272 298 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms