RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FMODQ06828 376 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 TAF13Q15543 124 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 NHLRC3Q5JS37 347 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 ELP2Q6IA86 826 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 ANKRD16Q6P6B7 361 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF440Q8IYI8 595 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 GALNT16Q8N428 558 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 PDE7BQ9NP56 450 aa13.17□□□□□ -0.3
SCARB2-221ENST00000640341 COA3Q9Y2R0 106 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-221ENST00000640341 TRBV5-5A0A0J9YX44 114 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 TEX51A0A1B0GUA7 166 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 H0YIG0 161 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 KCNAB3O43448 404 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 NMBP08949 121 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 CPN1P15169 458 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 ARRB1P49407 418 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-221ENST00000640341 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 SPICQ8N5J4 248 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 OR6M1Q8NGM8 313 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 CASTOR1Q8WTX7 329 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 CMBLQ96DG6 245 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 CMTM3Q96MX0 182 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 GMEB2Q9UKD1 530 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
SCARB2-221ENST00000640341 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 SPAG17Q6Q759 2223 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 TMEM272A0A1B0GTI8 110 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 FAM221BA6H8Z2 402 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 CD2P06729 351 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 NAT1P18440 290 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 IL11P20809 199 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 HSD17B7P56937 341 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCARB2-221ENST00000640341 PRSS42Q7Z5A4 293 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 EID2Q8N6I1 236 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 EXD3Q8N9H8 876 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 ASB12Q8WXK4 309 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 HOXB13Q92826 284 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-221ENST00000640341 LCORQ96JN0 433 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-221ENST00000640341 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-221ENST00000640341 MESP1Q9BRJ9 268 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 TMEM185BQ9H7F4 350 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 VDAC3Q9Y277 283 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 PCNX3Q9H6A9 2034 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 RLN2P04090 185 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 M6PRP20645 277 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 SLC17A1Q14916 467 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 MOGAT2Q3SYC2 334 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 STPG2Q8N412 459 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 OR13C3Q8NGS6 347 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 TCTN2Q96GX1 697 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 MFRPQ9BY79 579 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 WBP1LQ9NX94 342 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
SCARB2-221ENST00000640341 FRYLO94915 3013 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 GP1BBP13224 206 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 GABRG1Q8N1C3 465 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 BEST3Q8N1M1 668 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 SPACA5Q96QH8 159 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF587Q96SQ5 575 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-221ENST00000640341 NUDT22Q9BRQ3 303 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 APMAPQ9HDC9 416 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 LOC100289279A0A1B0GTE1 492 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 OR2M5A3KFT3 312 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 SNRPGP15A8MWD9 76 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 CYB5AP00167 134 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 CD1AP06126 327 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 PPP3CBP16298 524 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 DRD1P21728 446 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 VAMP1P23763 118 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 HTR2CP28335 458 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
SCARB2-221ENST00000640341 COMMD2Q86X83 199 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 OR1J2Q8NGS2 313 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 DMRTA2Q96SC8 542 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 ABHD6Q9BV23 337 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 MKL2Q9ULH7 1088 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 PLCL2Q9UPR0 1127 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
SCARB2-221ENST00000640341 TMEM82A0PJX8 343 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 SHISA8B8ZZ34 492 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 H3BML4 177 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 IL33O95760 270 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 CAPZBP47756 277 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 INSM1Q01101 510 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 GK2Q14410 553 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 CDNFQ49AH0 187 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 TMEM225Q6GV28 225 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 TMEM81Q6P7N7 255 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 CFAP77Q6ZQR2 320 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 MAMDC2Q7Z304 686 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF546Q86UE3 836 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms