RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FAM172BPA6NC97 362 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.52□□□□□ -0.25
TRIM3-215ENST00000639856 MS4A18H0YCH9 400 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 YES1P07947 543 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 FREM3P0C091 2139 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 HLA-DOBP13765 273 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 CRABP1P29762 137 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 KIR3DL2P43630 455 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 CLDN12P56749 244 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 MS4A18Q3C1V0 323 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 WDR38Q5JTN6 314 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 IZUMO1Q8IYV9 350 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 KDM8Q8N371 416 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 OR51A4Q8NGJ6 313 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 OR10AC1Q8NH08 325 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM106AQ96A25 262 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 C7orf50Q9BRJ6 194 aaKnown RBP13.52□□□□□ -0.25
TRIM3-215ENST00000639856 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 OR5V1Q9UGF6 321 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 FBXL2Q9UKC9 423 aa13.52□□□□□ -0.25
TRIM3-215ENST00000639856 TRAV8-7A0A075B6U6 113 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 CENPBD1B2RD01 187 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 GPR171O14626 319 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 SPARCP09486 303 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 RAB40ALP0C0E4 278 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 GSTT2P0CG29 244 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 GSTT2BP0CG30 244 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 CCR9P51686 369 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ADAM8P78325 824 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ROM1Q03395 351 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 GLO1Q04760 184 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 Q0VFX4 171 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 TEX30Q5JUR7 227 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 RAB40AQ8WXH6 277 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 AKAP1Q92667 903 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 THRSPQ92748 146 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 NUDT15Q9NV35 164 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 MCUBQ9NWR8 336 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 FARSAQ9Y285 508 aaKnown RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 A0A1W2PQ72 361 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 TRABD2BA6NFA1 517 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ETV2O00321 342 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF208O43345 1280 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 DHFRP00374 187 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 TCRBP04435 133 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 FOXK1P85037 733 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 KLF9Q13886 244 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 CDK10Q15131 360 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 OR7A5Q15622 319 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 TRIP6Q15654 476 aaKnown RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 CSRP2Q16527 193 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 KCTD18Q6PI47 426 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 LINGO2Q7L985 606 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 DND1Q8IYX4 353 aaKnown RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 RNF128Q8TEB7 428 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 DDIT4LQ96D03 193 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 S100A16Q96FQ6 103 aaKnown RBP13.51□□□□□ -0.25
TRIM3-215ENST00000639856 AUNIPQ9H7T9 357 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ING3Q9NXR8 418 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 NUBP2Q9Y5Y2 271 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ETV7Q9Y603 341 aa13.51□□□□□ -0.25
TRIM3-215ENST00000639856 ARPC4-TTLL3A0A0A6YYG9 625 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 A6NIZ1 184 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 ANXA2P2A6NMY6 339 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 ANXA2P07355 339 aaKnown RBP13.5□□□□□ -0.25
TRIM3-215ENST00000639856 MSX1P28360 303 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 RCVRNP35243 200 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 GDNFP39905 211 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 RAP1BP61224 184 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 RAP1AP62834 184 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 TCF15Q12870 199 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 ODF4Q2M2E3 257 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 STPG1Q5TH74 334 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 SLC22A10Q63ZE4 541 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 TMPRSS12Q86WS5 348 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 WDSUB1Q8N9V3 476 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 SYNPRQ8TBG9 265 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 ASB10Q8WXI3 467 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 CACNG6Q9BXT2 260 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 PLEKHA1Q9HB21 404 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 PAQR5Q9NXK6 330 aaPredicted RBP13.5□□□□□ -0.25
TRIM3-215ENST00000639856 COA3Q9Y2R0 106 aaPredicted RBP13.5□□□□□ -0.25
TRIM3-215ENST00000639856 PCDHGA1Q9Y5H4 931 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 CNTRLQ7Z7A1 2325 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
TRIM3-215ENST00000639856 TRAV6A0A075B6T7 132 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 A0A0A6YYJ9 748 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 C7orf66A4D0T2 115 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 GABARAPH6UMI1 98 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SULT1B1O43704 296 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 EFNA2O43921 213 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 IGHEP01854 428 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms