RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 UPK3AO75631 287 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 SLC22A5O76082 557 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 CA1P00915 261 aaPredicted RBP-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 GPR89BP0CG08 455 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 COX5AP20674 150 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 MAS1LP35410 378 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 GPR6P46095 362 aaPredicted RBP-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 MERTKQ12866 999 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 KLHL38Q2WGJ6 581 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 TMEM176BQ3YBM2 270 aaPredicted RBP-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 RPUSD3Q6P087 351 aaKnown RBP-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 FBXW12Q6X9E4 464 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 UTS2BQ765I0 119 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 TMEM17Q86X19 198 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 FAM184AQ8NB25 1140 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 NTAN1Q96AB6 310 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 SKA1Q96BD8 255 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 DNAJC30Q96LL9 226 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 EDEM2Q9BV94 578 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 GGTLC1Q9BX51 225 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 TBL1XR1Q9BZK7 514 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 LPAR2Q9HBW0 351 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 MRPL47Q9HD33 250 aaKnown RBP-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 HOMER3Q9NSC5 361 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 AIPL1Q9NZN9 384 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 DOK5Q9P104 306 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 MAD2L2Q9UI95 211 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 CELSR1Q9NYQ6 3014 aa-1.28□□□□□ -2.61
LMBR1-222ENST00000638959 PXDNLA1KZ92 1463 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 LOC105371045A0A1W2PR82 267 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 CCDC182A6NF36 153 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 SLC31A1O15431 190 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 TM7SF2O76062 418 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 ZNF43P17038 809 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 PRDX2P32119 198 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 HRH1P35367 487 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 TGM4P49221 684 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 ERVK-25P63136 954 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 NCBP1Q09161 790 aaKnown RBP-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 ZNF77Q15935 545 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 ZSCAN26Q16670 478 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 FAM201AQ5SY85 155 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 C10orf91Q5T1B1 145 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 AVPI1Q5T686 147 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 SLC25A25Q6KCM7 469 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 TEX43Q6ZNM6 134 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 MOB3BQ86TA1 216 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 FAM71AQ8IYT1 594 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 METTL13Q8N6R0 699 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 LEMD2Q8NC56 503 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 OR10D4PQ8NGN7 298 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 SLC6A7Q99884 636 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 AKIRIN1Q9H9L7 192 aaPredicted RBP-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 GIN1Q9NXP7 522 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 CGNQ9P2M7 1197 aaKnown RBP-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 P2RX2Q9UBL9 471 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 SLC7A11Q9UPY5 501 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 OTOGQ6ZRI0 2925 aa-1.29□□□□□ -2.62
LMBR1-222ENST00000638959 COL1A1P02452 1464 aaPredicted RBP-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 MSH6P52701 1360 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 NYNRINQ9P2P1 1898 aaKnown RBP-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 A0A0B4J2A0 478 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 A0A0U1RRA0 63 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 A0A1W2PQL4 384 aaPredicted RBP-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 WASH3PC4AMC7 463 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 CMC4P56277 68 aaPredicted RBP-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 UBE2NP61088 152 aaKnown RBP-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 TNFRSF17Q02223 184 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 LIPEQ05469 1076 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 CDH17Q12864 832 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 CASP8Q14790 479 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 KLHL40Q2TBA0 621 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 MPP7Q5T2T1 576 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 PET117Q6UWS5 81 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 UNQ6190/PRO20217Q6UXQ8 127 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 WASH2PQ6VEQ5 465 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 PEX26Q7Z412 305 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 METTL23Q86XA0 190 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 LYPD6Q86Y78 171 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 MSRB3Q8IXL7 192 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 KDM8Q8N371 416 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 RAB33BQ9H082 229 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 TBK1Q9UHD2 729 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 SHPKQ9UHJ6 478 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 RWDD2AQ9UIY3 292 aa-1.3□□□□□ -2.62
LMBR1-222ENST00000638959 FLNCQ14315 2725 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 KIAA2026Q5HYC2 2103 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 FRMPD4Q14CM0 1322 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 A0A1B0GVL5 298 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 ARHGAP42A6NI28 874 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 H3BQ85 93 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 RS1O15537 224 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 UTS2O95399 124 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 RPN2P04844 631 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 IGF1P05019 195 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 TCN1P20061 433 aaPredicted RBP-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 TCF7P36402 384 aaPredicted RBP-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 HCAR3P49019 387 aa-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 CNN1P51911 297 aaKnown RBP-1.31□□□□□ -2.62
LMBR1-222ENST00000638959 ELF3P78545 371 aaPredicted RBP-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms