RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TAAR8Q969N4 342 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 ZMYND19Q96E35 227 aaPredicted RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 NPAS1Q99742 590 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 ZNF649Q9BS31 505 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 CHRNA9Q9UGM1 479 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 TEX13CA0A0J9YWL9 993 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 TMEM129A0AVI4 362 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 TOXO94900 526 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 NDUFB7P17568 137 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 ZNF74Q16587 644 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 ST3GAL2Q16842 350 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 AKIRIN2Q53H80 203 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 RAB12Q6IQ22 244 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 C11orf88Q6PI97 169 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 SLC16A13Q7RTY0 426 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 KLBQ86Z14 1044 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 PRR18Q8N4B5 295 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 ZNRF4Q8WWF5 429 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 SLC25A36Q96CQ1 311 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 PFDN5Q99471 154 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 CCDC86Q9H6F5 360 aaKnown RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 ESRP2Q9H6T0 727 aaKnown RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 MIOXQ9UGB7 285 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 GPN3Q9UHW5 284 aaPredicted RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 GAB2Q9UQC2 676 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 TRABD2BA6NFA1 517 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 MAGEB4O15481 346 aaPredicted RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 OR2J2O76002 312 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ANXA3P12429 323 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 CELP19835 753 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 STOMP27105 288 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 EIF2S3P41091 472 aaKnown RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 SELENOPP49908 381 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 SLC26A5P58743 744 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ARIH2OSQ8N7S6 290 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 OR5W2Q8NH69 310 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 Q96M85 177 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ADAM19Q9H013 955 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 LDAHQ9H6V9 325 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 MMP25Q9NPA2 562 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 PPIEQ9UNP9 301 aaKnown RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 PTRH2Q9Y3E5 179 aaKnown RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 B3GALT1Q9Y5Z6 326 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 COL5A1P20908 1838 aaPredicted RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 DAPL1A0PJW8 107 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ETFDHQ16134 617 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 LIPNQ5VXI9 398 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 VASNQ6EMK4 673 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 RGS7BPQ6MZT1 257 aaPredicted RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 CD200R1LQ6Q8B3 271 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 LYPD4Q6UWN0 246 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 IL20RBQ6UXL0 311 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 MEX3BQ6ZN04 569 aaKnown RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 ACBD7Q8N6N7 88 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 WDR89Q96FK6 387 aaPredicted RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 OR51J1Q9H342 316 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 MED11Q9P086 117 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ZNF346Q9UL40 294 aaKnown RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 IFNGP01579 166 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 IGHA1P01876 353 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 GP1BBP13224 206 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 CD46P15529 392 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 PGCP20142 388 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 NUP62P37198 522 aaPredicted RBP10.38□□□□□ -0.75
CLN6-217ENST00000636964 GSK3AP49840 483 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 FAM189A2Q15884 450 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 OVCH2Q7RTZ1 564 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ZNF485Q8NCK3 441 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 TSSK2Q96PF2 358 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 TMED9Q9BVK6 235 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 OR11A1Q9GZK7 315 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 ASB6Q9NWX5 421 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 COPZ2Q9P299 210 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 MLXQ9UH92 298 aa10.38□□□□□ -0.75
CLN6-217ENST00000636964 RIF1Q5UIP0 2472 aaKnown RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 A0A1W2PQD3 144 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 OR6C68A6NDL8 312 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 SLC22A31A6NKX4 558 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 A8MXK9 166 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 NUDT19A8MXV4 375 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 EIF4E2O60573 245 aaKnown RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 LY86O95711 162 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 LPLP06858 475 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 SLC6A8P48029 635 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 P2RX1P51575 399 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 CTXN1P60606 82 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 MC2RQ01718 297 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 HSF2Q03933 536 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 CBFBQ13951 182 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 INPP5JQ15735 1006 aaPredicted RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 SLC36A2Q495M3 483 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 METAP1DQ6UB28 335 aaPredicted RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 TMEM205Q6UW68 189 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 DPY19L2P2Q6ZN68 376 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 RFLNBQ8N5W9 214 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 C17orf47Q8NEP4 570 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms