RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TMEM5Q9Y2B1 443 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 CMAHPQ9Y471 501 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SNX13Q9Y5W8 968 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 FKBP7Q9Y680 259 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 ENPP4Q9Y6X5 453 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 FREM1Q5H8C1 2179 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 TACC2O95359 2948 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ABCA4P78363 2273 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 TRAV27A0A087WT01 109 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 A0A087WUU8 490 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SLC22A23A1A5C7 686 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SH3PXD2BA1X283 911 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NPIPB13A6NJU9 1138 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NPIPB4C9JG80 1138 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 hCG_2039718K7EN88 272 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 XKRYO14609 159 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NDUFS7O75251 213 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 TRMUO75648 421 aaKnown RBP5.53□□□□□ -1.52
TCF4-249ENST00000625716 STAMBPO95630 424 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 CSF3P09919 207 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 HSD17B1P14061 328 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 MAKP20794 623 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NR4A1P22736 598 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 APLNRP35414 380 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 THBS4P35443 961 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 PDLIM4P50479 330 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SELENOVP59797 346 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 RPL27P61353 136 aaKnown RBP5.53□□□□□ -1.52
TCF4-249ENST00000625716 HSF2Q03933 536 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 RAB39AQ14964 217 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ADIPOQQ15848 244 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 CARTPTQ16568 116 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SGCAQ16586 387 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SPATS1Q496A3 300 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NRN1LQ496H8 165 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ZBED5Q49AG3 693 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 THEM4Q5T1C6 240 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 TBPL2Q6SJ96 375 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 DEFB107AQ8IZN7 70 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 LRRC18Q8N456 261 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 CCDC197Q8NCU1 140 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 FAM156AQ8NDB6 213 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 RBM15BQ8NDT2 890 aaKnown RBP5.53□□□□□ -1.52
TCF4-249ENST00000625716 OR4K5Q8NGD3 323 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NSMAFQ92636 917 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 HTRA1Q92743 480 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 PYURFQ96I23 114 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NSMCE2Q96MF7 247 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 TNFRSF13CQ96RJ3 184 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ZNF347Q96SE7 839 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 CCT8L2Q96SF2 557 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SH3GL3Q99963 347 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ALG12Q9BV10 488 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 MRPL13Q9BYD1 178 aaKnown RBP5.53□□□□□ -1.52
TCF4-249ENST00000625716 ZNF442Q9H7R0 627 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 GORASP2Q9H8Y8 452 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SEC61A2Q9H9S3 476 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 SMURF2Q9HAU4 748 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 CDH20Q9HBT6 801 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 NOX3Q9HBY0 568 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 CCNB1IP1Q9NPC3 277 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ARL8BQ9NVJ2 186 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 TMEM38BQ9NVV0 291 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 GRHPRQ9UBQ7 328 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 ZNF346Q9UL40 294 aaKnown RBP5.53□□□□□ -1.52
TCF4-249ENST00000625716 TMCC3Q9ULS5 477 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 V9GYQ6 96 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 DSCAMO60469 2012 aa5.53□□□□□ -1.52
TCF4-249ENST00000625716 F8P00451 2351 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 RAI1Q7Z5J4 1906 aaPredicted RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 AKAP6Q13023 2319 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 A0A1W2PPL8 197 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 A0A1W2PRQ8 180 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 UNC119BA6NIH7 251 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 B2RBV5 119 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 FFAR1O14842 300 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 ARPC2O15144 300 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 NDUFB2O95178 105 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 GADD45GO95257 159 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SLC2A10O95528 541 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 FAM107AO95990 144 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SERPINA5P05154 406 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 FABP3P05413 133 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 TSPAN19P0C672 248 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 PATE4P0C8F1 98 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SLC25A16P16260 332 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 ZNF14P17017 642 aaPredicted RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 CCNOP22674 350 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MSX2P35548 267 aaPredicted RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 IFNGR2P38484 337 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 RAD52P43351 418 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 GPR4P46093 362 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 PPOXP50336 477 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 PCBD1P61457 104 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 ERVK-25P63136 954 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MRPS34P82930 218 aaKnown RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 SPIBQ01892 262 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 HGFACQ04756 655 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 RUNX1T1Q06455 604 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms