RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TOP3AQ13472 1001 aaPredicted RBP10.72□□□□□ -0.69
LINC00963-217ENST00000624009 SEC23BQ15437 767 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 KRT80Q6KB66 452 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 VHLLQ6RSH7 139 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 SMARCD3Q6STE5 483 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 ZNF525Q8N782 197 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 RSRC1Q96IZ7 334 aaKnown RBP10.72□□□□□ -0.69
LINC00963-217ENST00000624009 ZNF570Q96NI8 536 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 SORCS2Q96PQ0 1159 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 TRIM15Q9C019 465 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 CDH20Q9HBT6 801 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 CCNB1IP1Q9NPC3 277 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 VSX1Q9NZR4 365 aaPredicted RBP10.72□□□□□ -0.69
LINC00963-217ENST00000624009 GPR160Q9UJ42 338 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 TIMM10BQ9Y5J6 103 aa10.72□□□□□ -0.69
LINC00963-217ENST00000624009 IGLV3-9A0A075B6K5 115 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 IGHV4-30-2A0A087WSY4 118 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 IGKV1D-43A0A0B4J1Z2 117 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 TEX13CA0A0J9YWL9 993 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 UNC119BA6NIH7 251 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 VWC2LB2RUY7 222 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 M0R233 179 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 IDH3BO43837 385 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 T-ENOLP0DO92 83 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ZNF250P15622 560 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 TUBG1P23258 451 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 GIFP27352 417 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 APLNRP35414 380 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ERVK-25P63136 954 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 MRPS11P82912 194 aaKnown RBP10.71□□□□□ -0.69
LINC00963-217ENST00000624009 SPIBQ01892 262 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 HSF2Q03933 536 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 KRTAP1-1Q07627 177 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 KRR1Q13601 381 aaKnown RBP10.71□□□□□ -0.69
LINC00963-217ENST00000624009 MOGQ16653 247 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 MESTQ5EB52 335 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 PABPC1L2AQ5JQF8 200 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 RPL13AP3Q6NVV1 102 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 C1orf94Q6P1W5 598 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 PGM2L1Q6PCE3 622 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ZER1Q7Z7L7 766 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ZDHHC21Q8IVQ6 265 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 LRRC18Q8N456 261 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ASB9Q96DX5 294 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 POLE4Q9NR33 117 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 TUBG2Q9NRH3 451 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ATPIF1Q9UII2 106 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 TMCC3Q9ULS5 477 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ADAM18Q9Y3Q7 739 aa10.71□□□□□ -0.69
LINC00963-217ENST00000624009 ANK3Q12955 4377 aaKnown RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 C12orf71A8MTZ7 269 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 CD5LO43866 347 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 GPRIN2O60269 458 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 DIRAS1O95057 198 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 TP53P04637 393 aaPredicted RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 PATE4P0C8F1 98 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 ZNF32P17041 273 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 STOMP27105 288 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 CRABP1P29762 137 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 CDAP32320 146 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 MSX2P35548 267 aaPredicted RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 GSSP48637 474 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 UCP2P55851 309 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 FXYD6P3P58550 94 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 LSM6P62312 80 aaKnown RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 RFX4Q33E94 735 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 RGS7BPQ6MZT1 257 aaPredicted RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 IGFN1Q86VF2 1251 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 DHFR2Q86XF0 187 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 SVOPLQ8N434 492 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 CPEB3Q8NE35 698 aaKnown RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 OR52J3Q8NH60 311 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 IPCEF1Q8WWN9 437 aaPredicted RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 NSMAFQ92636 917 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 POM121L2Q96KW2 1035 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 Q96M85 177 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 VRK1Q99986 396 aaPredicted RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 PIMREGQ9BSJ6 248 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 MRPL37Q9BZE1 423 aaKnown RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 OR2H1Q9GZK4 316 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 SLCO1C1Q9NYB5 712 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 NDRG4Q9ULP0 352 aaKnown RBP10.7□□□□□ -0.7
LINC00963-217ENST00000624009 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
LINC00963-217ENST00000624009 DOCK11Q5JSL3 2073 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 TCRBV5S2A0A599 114 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 J3QW42 95 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 OR10H3O60404 316 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 KHDRBS3O75525 346 aaKnown RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 USF1P22415 310 aaPredicted RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 LAP3P28838 519 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 RRM2P31350 389 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 SLC6A6P31641 620 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 PPP2R2BQ00005 443 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 PSG4Q00888 419 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 SCRN3Q0VDG4 424 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 TRAP1Q12931 704 aaKnown RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 TSPAN31Q12999 210 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 KCNMB1Q16558 191 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 SGCAQ16586 387 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms