RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 OR52E5Q8NH55 327 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 RDH11Q8TC12 318 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 TCP10LQ8TDR4 215 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 RNF133Q8WVZ7 376 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 ACOT11Q8WXI4 607 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 XPO6Q96QU8 1125 aaKnown RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 CYP2S1Q96SQ9 504 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 FMO2Q99518 471 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 SDHCQ99643 169 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 FEM1AQ9BSK4 669 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 SYT4Q9H2B2 425 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 C1orf198Q9H425 327 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 PIGUQ9H490 435 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 WDR55Q9H6Y2 383 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 NIPAL2Q9H841 368 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 ISG20L2Q9H9L3 353 aaKnown RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 GPN2Q9H9Y4 310 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 ANKHQ9HCJ1 492 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 ZC4H2Q9NQZ6 224 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 NANSQ9NR45 359 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 RPS6KB2Q9UBS0 482 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 GHRLQ9UBU3 117 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 WARS2Q9UGM6 360 aaKnown RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 NXT1Q9UKK6 140 aaKnown RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 NUP50Q9UKX7 468 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 EIF3LQ9Y262 564 aaKnown RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 TBL2Q9Y4P3 447 aaKnown RBP2.88□□□□□ -1.95
BRCA1-229ENST00000621897 CDH10Q9Y6N8 788 aa2.88□□□□□ -1.95
BRCA1-229ENST00000621897 GOLGA6L10A6NI86 522 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CENPXA8MT69 81 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SIRPB1O00241 398 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SH2D1BO14796 132 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 AQP9O43315 295 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 GATCO43716 136 aaKnown RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 RAMP3O60896 148 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 HSBP1O75506 76 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 TOXO94900 526 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 DEXIO95424 95 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 LDOC1O95751 146 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ACTL6AO96019 429 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 F10P00742 488 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 FABP1P07148 127 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 GSTA1P08263 222 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 HOXC4P09017 264 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 OR4E1P0C645 316 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 NR2C1P13056 603 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 PVRP15151 417 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF7P17097 686 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CTRB1P17538 263 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 IMPDH1P20839 514 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 BCKDHBP21953 392 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 DCKP27707 260 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 HTR2CP28335 458 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 GABRR2P28476 465 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 EPHX2P34913 555 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 UGT2B10P36537 528 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 TNFSF9P41273 254 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CAPZBP47756 277 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CX3CR1P49238 355 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 GNG10P50151 68 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 MLF1P58340 268 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CXCR4P61073 352 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SELENBP1Q13228 472 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ATXN7L3Q14CW9 347 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 PDK2Q15119 407 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 OR4D1Q15615 310 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CHI3L2Q15782 390 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 KLHL38Q2WGJ6 581 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SLC36A2Q495M3 483 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 AKIRIN2Q53H80 203 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 PIGGQ5H8A4 983 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 LY6G6FQ5SQ64 297 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CTRB2Q6GPI1 263 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 OR5M10Q6IEU7 315 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 REEP3Q6NUK4 255 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CERS6Q6ZMG9 384 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF621Q6ZSS3 439 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 Q7L0L9 218 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 APOBEC3FQ8IUX4 373 aaKnown RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 GID4Q8IVV7 300 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 BOD1L2Q8IYS8 172 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 TBC1D19Q8N5T2 526 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CA5BP1Q8WTZ4 195 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF799Q96GE5 643 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 RNF170Q96K19 258 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ZFP3Q96NJ6 502 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CNN2Q99439 309 aaKnown RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 NICN1Q9BSH3 213 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 RSG1Q9BU20 258 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF426Q9BUY5 554 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 NMRAL1Q9HBL8 299 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 VCX3AQ9NNX9 186 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SLC17A5Q9NRA2 495 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 MRPL39Q9NYK5 338 aaKnown RBP2.87□□□□□ -1.95
BRCA1-229ENST00000621897 TAS2R9Q9NYW1 312 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 IL36GQ9NZH8 169 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CIDEBQ9UHD4 219 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 KLHL21Q9UJP4 597 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 C3orf18Q9UK00 162 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SLC22A13Q9Y226 551 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms