RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SEC61A2Q9H9S3 476 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 ELOVL3Q9HB03 270 aa19.08■□□□□ 0.64
SPAST-204ENST00000621856 DCDC2BA2VCK2 349 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 TMCC2O75069 709 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 TEX30Q5JUR7 227 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 PAMR1Q6UXH9 720 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 SLC22A16Q86VW1 577 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 ZNF679Q8IYX0 411 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 OR52N5Q8NH56 324 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 ROBO4Q8WZ75 1007 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 HSD17B8Q92506 261 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 RNF166Q96A37 237 aaPredicted RBP19.07■□□□□ 0.64
SPAST-204ENST00000621856 OR2M2Q96R28 347 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 MROQ9BYG7 248 aa19.07■□□□□ 0.64
SPAST-204ENST00000621856 GFRA3O60609 400 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 AQP8O94778 261 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 MTNR1BP49286 362 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 CLDN15P56746 228 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 HIST3H3Q16695 136 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 HYAL4Q2M3T9 481 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 FAM27D1Q5T7N8 215 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 MFSD4AQ8N468 514 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 ZFP62Q8NB50 900 aaPredicted RBP19.06■□□□□ 0.64
SPAST-204ENST00000621856 CPNE4Q96A23 557 aaPredicted RBP19.06■□□□□ 0.64
SPAST-204ENST00000621856 PNPLA2Q96AD5 504 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 MFRPQ9BY79 579 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 GLTPQ9NZD2 209 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 ZNF281Q9Y2X9 895 aa19.06■□□□□ 0.64
SPAST-204ENST00000621856 SHISA3A0PJX4 238 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 ACOT7O00154 380 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 SC5DO75845 299 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 LHX2P50458 406 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 TNFSF10P50591 281 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 RIDAP52758 137 aaKnown RBP19.05■□□□□ 0.64
SPAST-204ENST00000621856 CAV3P56539 151 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 ROM1Q03395 351 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 SRYQ05066 204 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 FOXC1Q12948 553 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 ZMAT1Q5H9K5 638 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 C16orf87Q6PH81 154 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 TRILQ7L0X0 811 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 DCXRQ7Z4W1 244 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 CROCCP3Q8IVE0 287 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 OR5AK2Q8NH90 309 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 CEP19Q96LK0 163 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 QPCTLQ9NXS2 382 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 PLEKHB1Q9UF11 243 aaPredicted RBP19.05■□□□□ 0.64
SPAST-204ENST00000621856 KLK13Q9UKR3 277 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 POLR1DQ9Y2S0 133 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 IQCMA0A1B0GVH7 501 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 CTDSP2O14595 271 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 RGS5O15539 181 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 NCR1O76036 304 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 SLC10A1Q14973 349 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 PCK2Q16822 640 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 FAM109AQ8N4B1 249 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 MEIOBQ8N635 442 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 ZIC4Q8N9L1 334 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 OR2G2Q8NGZ5 317 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 AP3S1Q92572 193 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 TMEM54Q969K7 222 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 PPIL3Q9H2H8 161 aaKnown RBP19.05■□□□□ 0.64
SPAST-204ENST00000621856 FRRS1LQ9P0K9 344 aa19.05■□□□□ 0.64
SPAST-204ENST00000621856 GATBO75879 557 aaKnown RBP19.04■□□□□ 0.64
SPAST-204ENST00000621856 ZFPL1O95159 310 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 CDAP32320 146 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 RPS11P62280 158 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPAST-204ENST00000621856 ABLIM2Q6H8Q1 611 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 OR7E24Q6IFN5 339 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 LRFN4Q6PJG9 635 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 CORO6Q6QEF8 472 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 ZNF775Q96BV0 537 aaPredicted RBP19.04■□□□□ 0.64
SPAST-204ENST00000621856 ZNF845Q96IR2 970 aaPredicted RBP19.04■□□□□ 0.64
SPAST-204ENST00000621856 OR14A2Q96R54 314 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 COMMD4Q9H0A8 199 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 EMC7Q9NPA0 242 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 LRP12Q9Y561 859 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 CSAG2Q9Y5P2 127 aa19.04■□□□□ 0.64
SPAST-204ENST00000621856 PTPRZ1P23471 2315 aaPredicted RBP19.04■□□□□ 0.64
SPAST-204ENST00000621856 A0A1B0GTH9 108 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 KLK10O43240 276 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 ARL6IP5O75915 188 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 WNT11O96014 354 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 SELENOPP49908 381 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 YIF1BQ5BJH7 314 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 ZNF544Q6NX49 715 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 TMEM123Q8N131 208 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 ZNF676Q8N7Q3 588 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 TEX19Q8NA77 164 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 ST7LQ8TDW4 575 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 RNF128Q8TEB7 428 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 ABTB1Q969K4 478 aaPredicted RBP19.03■□□□□ 0.64
SPAST-204ENST00000621856 INTS12Q96CB8 462 aaKnown RBP19.03■□□□□ 0.64
SPAST-204ENST00000621856 MAP6Q96JE9 813 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 EXO5Q9H790 373 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 GTF2A1LQ9UNN4 478 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 FLVCR1Q9Y5Y0 555 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 CACNA1CQ13936 2221 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 A0A1W2PPK0 400 aa19.03■□□□□ 0.64
SPAST-204ENST00000621856 ZNF716A6NP11 495 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms