RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TAS2R16Q9NYV7 291 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 RAB22AQ9UL26 194 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 DIMT1Q9UNQ2 313 aaKnown RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SLC5A6Q9Y289 635 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 A0A1W2PS29 197 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SIRPB1O00241 398 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 UBBP0CG47 229 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SLC6A12P48065 614 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 USP51Q70EK9 711 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OR52N5Q8NH56 324 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 NRG4Q8WWG1 115 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SLAMF6Q96DU3 332 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 PLCXD1Q9NUJ7 323 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 CTSFQ9UBX1 484 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 POLDIP2Q9Y2S7 368 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 LOC100289279A0A1B0GTE1 492 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 ATP6V1G1O75348 118 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 CBR3O75828 277 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 HTR2BP41595 481 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 RAC1P63000 192 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 HTRA4P83105 476 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OR11G2Q8NGC1 345 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OR51E1Q8TCB6 317 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 LINC00615Q96LM1 132 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 UHRF2Q96PU4 802 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 FAM90A27PA6NNH2 459 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 GMDSO60547 372 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 EMDP50402 254 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 PNLIPRP2P54317 469 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SRPXP78539 464 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 CLN3Q13286 438 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SFXN4Q6P4A7 337 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SUMF2Q8NBJ7 301 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OR2V1Q8NHB1 315 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 SLC38A1Q9H2H9 487 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 GPR55Q9Y2T6 319 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 TRAV17A0A0B4J275 112 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 MMP11P24347 488 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ACVR1Q04771 509 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 DUSP8Q13202 625 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 DESI1Q6ICB0 168 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 CORO6Q6QEF8 472 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ANGPTL5Q86XS5 388 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ENTHD1Q8IYW4 607 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 FBXL14Q8N1E6 418 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 PAQR8Q8TEZ7 354 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 TRGV5A0A0B4J1U4 118 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 CLN5O75503 358 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 PAPLNO95428 1278 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 SOD1P00441 154 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 MTNR1BP49286 362 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 MRPL19P49406 292 aaKnown RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 RBP2P50120 134 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 RAB5BP61020 215 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ACKR1Q16570 336 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 FAM199XQ6PEV8 388 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 CATSPERDQ86XM0 798 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 FAM3DQ96BQ1 224 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 TECTBQ96PL2 329 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 SLC16A6O15403 523 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 GLAP06280 429 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 GNB3P16520 340 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ACHEP22303 614 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 HNF4GQ14541 408 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 RBMS2Q15434 407 aaKnown RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 HES3Q5TGS1 186 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 FBXL6Q8N531 539 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 NT5CQ8TCD5 201 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 GIMAP1Q8WWP7 306 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 TEX37Q96LM6 180 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 FAM173AQ9BQD7 235 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 TUBB1Q9H4B7 451 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 BCO1Q9HAY6 547 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 LRP5LA4QPB2 252 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF254O75437 659 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 SCG5P05408 212 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 CALCBP10092 127 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 DSCR4P56555 118 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF385BQ569K4 471 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF628Q5EBL2 1059 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 BEX5Q5H9J7 111 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 FCRL6Q6DN72 434 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 TP53I13Q8NBR0 393 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 OR51F2Q8NH61 342 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 REEP6Q96HR9 211 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLIP1-219ENST00000620786 PSORS1C1Q9UIG5 152 aa10.38□□□□□ -0.75
CLIP1-219ENST00000620786 K7EPK0 472 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SDHAP31040 664 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 TNFSF8P32971 234 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 METAP1P53582 386 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF718Q3SXZ3 478 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 RGS7BPQ6MZT1 257 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 LHFPL2Q6ZUX7 228 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 NLRC3Q7RTR2 1065 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 PELI3Q8N2H9 469 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms