RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 FAPQ12884 760 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 AIMP2Q13155 320 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 TNK1Q13470 666 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 STAC2Q6ZMT1 411 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 Q6ZTK2 550 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 SLC16A14Q7RTX9 510 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 OR6M1Q8NGM8 313 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 SPACA5Q96QH8 159 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 PHB2Q99623 299 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 NKX3-1Q99801 234 aaPredicted RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 PRRT1Q99946 306 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 AUNIPQ9H7T9 357 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 MCTS1Q9ULC4 181 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 HIF3AQ9Y2N7 669 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 A0A1B0GTH9 108 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 LALBAP00709 142 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 HLA-AP01891 365 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 UBCP0CG48 685 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 ATF1P18846 271 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ZNF93P35789 620 aaPredicted RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 FOXL2P58012 376 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 C1QL3Q5VWW1 255 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 OR10K2Q6IF99 312 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 KANSL1Q7Z3B3 1105 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ELMOD2Q8IZ81 293 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 OR6V1Q8N148 313 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 RNF170Q96K19 258 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 TMEM59Q9BXS4 323 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 SLC22A11Q9NSA0 550 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 A6NLC8 198 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 TPD52L2O43399 206 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 MRPL33O75394 65 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 DDAH2O95865 285 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 IGHV3-9P01782 118 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ATF4P18848 351 aaPredicted RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 AGTR1P30556 359 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ARG2P78540 354 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 MFAP5Q13361 173 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 C20orf85Q9H1P6 137 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 BOKQ9UMX3 212 aaPredicted RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 TMEM82A0PJX8 343 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 BHLHE40O14503 412 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 DVL2O14641 736 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ZFPL1O95159 310 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 CD63P08962 238 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 AKR1D1P51857 326 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ARHGDIBP52566 201 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 SELENBP1Q13228 472 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 TOMM34Q15785 309 aaPredicted RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 EXT1Q16394 746 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 DMRTC1Q5HYR2 192 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 CCDC28AQ8IWP9 274 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 MFSD8Q8NHS3 518 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 PIGCQ92535 297 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ZBTB8AQ96BR9 441 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 SLAMF6Q96DU3 332 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ENKD1Q9H0I2 346 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 TAS2R3Q9NYW6 316 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 MRPS28Q9Y2Q9 187 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 NEUROG3Q9Y4Z2 214 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ARHGEF17Q96PE2 2063 aaPredicted RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 GABARAPH6UMI1 98 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 CTSBP07858 339 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 QDPRP09417 244 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 GABRB1P18505 474 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 GNRHRP30968 328 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 DDOSTP39656 456 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 CARD18P57730 90 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 FGL1Q08830 312 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 SLC17A1Q14916 467 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 EBPQ15125 230 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 POU4F3Q15319 338 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 MRPL21Q7Z2W9 205 aaKnown RBP11.91□□□□□ -0.5
TCF3-220ENST00000611869 PXKQ7Z7A4 578 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ABHD6Q9BV23 337 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 GON7Q9BXV9 100 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 WIF1Q9Y5W5 379 aa11.91□□□□□ -0.5
TCF3-220ENST00000611869 ASXL3Q9C0F0 2248 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 PRICKLE3O43900 615 aaPredicted RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 EIF1BO60739 113 aaKnown RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 RAF1P04049 648 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 CT45A8P0DMV1 189 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 CT45A9P0DMV2 189 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 SDHBP21912 280 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 TAS2R20P59543 309 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 MEF2DQ14814 521 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 CT45A2Q5DJT8 189 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 TMEM81Q6P7N7 255 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 TSEN54Q7Z6J9 526 aaKnown RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 ANGPTL5Q86XS5 388 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 SLC25A43Q8WUT9 341 aaPredicted RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 TM4SF19Q96DZ7 209 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms