RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 WFDC11Q8NEX6 87 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 OR9Q2Q8NGE9 314 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 MS4A3Q96HJ5 214 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 SAMD8Q96LT4 415 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 Q96MF0 132 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 GPA33Q99795 319 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 CADM1Q9BY67 442 aaKnown RBP16.77■□□□□ 0.28
UPF1-212ENST00000601689 SYT4Q9H2B2 425 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 PLK3Q9H4B4 646 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 ZNF556Q9HAH1 456 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 VSX1Q9NZR4 365 aaPredicted RBP16.77■□□□□ 0.28
UPF1-212ENST00000601689 TIMM10BQ9Y5J6 103 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 FKBP7Q9Y680 259 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 CDH10Q9Y6N8 788 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 CIB2O75838 187 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 GASTP01350 101 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 ZNF35P13682 527 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 ZNF26P17031 533 aaPredicted RBP16.76■□□□□ 0.27
UPF1-212ENST00000601689 LAP3P28838 519 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 GLRXP35754 106 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 NUDT6P53370 316 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 SCRN3Q0VDG4 424 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 COX10Q12887 443 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 ARL9Q6T311 187 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 RASSF6Q6ZTQ3 369 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 CCDC121Q6ZUS5 278 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 GLB1L2Q8IW92 636 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 CLDN22Q8N7P3 220 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 OR10G2Q8NGC3 310 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 OR4C15Q8NGM1 316 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 GIPC3Q8TF64 312 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 SNX18Q96RF0 628 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 TBC1D23Q9NUY8 699 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 GPR160Q9UJ42 338 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 BAIAP2Q9UQB8 552 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 POLR1DQ9Y2S0 133 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 UGT2A1Q9Y4X1 527 aa16.76■□□□□ 0.27
UPF1-212ENST00000601689 IGKV1D-43A0A0B4J1Z2 117 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 FAM171A2A8MVW0 826 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 H7C417 338 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 ZNF32P17041 273 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 CCNOP22674 350 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 THBS4P35443 961 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 GDI2P50395 445 aaKnown RBP16.75■□□□□ 0.27
UPF1-212ENST00000601689 CBX1P83916 185 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 HGFACQ04756 655 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 EFNB3Q15768 340 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 CLEC12BQ2HXU8 276 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 PABPC1L2AQ5JQF8 200 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 C1orf146Q5VVC0 180 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 C11orf71Q6IPW1 123 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 LEG1Q6P5S2 330 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 MYPOPQ86VE0 399 aaPredicted RBP16.75■□□□□ 0.27
UPF1-212ENST00000601689 C1orf174Q8IYL3 243 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 HTRA1Q92743 480 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 NABP1Q96AH0 204 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 ZNF75AQ96N20 296 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 TMUB1Q9BVT8 246 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 DGCR6LQ9BY27 220 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 BCL2L14Q9BZR8 327 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 RAB1BQ9H0U4 201 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 DYNLRB1Q9NP97 96 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 POLE4Q9NR33 117 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 IL20Q9NYY1 176 aa16.75■□□□□ 0.27
UPF1-212ENST00000601689 TCRBV3S1A0A5B6 114 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 DEAF1O75398 565 aaPredicted RBP16.74■□□□□ 0.27
UPF1-212ENST00000601689 SNAP29O95721 258 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 STOMP27105 288 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 DSCR9P59020 149 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 LSM6P62312 80 aaKnown RBP16.74■□□□□ 0.27
UPF1-212ENST00000601689 GLO1Q04760 184 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 PPP1R8Q12972 351 aaKnown RBP16.74■□□□□ 0.27
UPF1-212ENST00000601689 ADIPOQQ15848 244 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 CLEC12AQ5QGZ9 265 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 RGS7BPQ6MZT1 257 aaPredicted RBP16.74■□□□□ 0.27
UPF1-212ENST00000601689 FOXL2NBQ6ZUU3 175 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 OR10H5Q8NGA6 315 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 FGFBP3Q8TAT2 258 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 VRK1Q99986 396 aaPredicted RBP16.74■□□□□ 0.27
UPF1-212ENST00000601689 TEX12Q9BXU0 123 aa16.74■□□□□ 0.27
UPF1-212ENST00000601689 NDRG4Q9ULP0 352 aaKnown RBP16.74■□□□□ 0.27
UPF1-212ENST00000601689 ARRDC5A6NEK1 342 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 EBAG9O00559 213 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 SSX4O60224 188 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 FKBP6O75344 327 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 IFNGP01579 166 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 MMP7P09237 267 aaPredicted RBP16.73■□□□□ 0.27
UPF1-212ENST00000601689 HIST1H1CP16403 213 aaKnown RBP16.73■□□□□ 0.27
UPF1-212ENST00000601689 CTLA4P16410 223 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 PCSK6P29122 969 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 CDKN2AP42771 156 aaKnown RBP16.73■□□□□ 0.27
UPF1-212ENST00000601689 EVX1P49640 407 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 FXYD6P3P58550 94 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 AQP6Q13520 282 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 MOGQ16653 247 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 SWI5Q1ZZU3 235 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 SLC36A3Q495N2 470 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 CLEC2AQ6UVW9 174 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 ZNF584Q8IVC4 421 aa16.73■□□□□ 0.27
UPF1-212ENST00000601689 OR2T33Q8NG76 320 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms