RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 BPIFA2Q96DR5 249 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 C1orf198Q9H425 327 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 MYEF2Q9P2K5 600 aaKnown RBP16.08■□□□□ 0.16
PNKP-213ENST00000599543 ZNF346Q9UL40 294 aaKnown RBP16.08■□□□□ 0.16
PNKP-213ENST00000599543 TRAV27A0A087WT01 109 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 SLC22A23A1A5C7 686 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 FAM157BP0CG42 384 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 RRM2P31350 389 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 DAP3P51398 398 aaKnown RBP16.07■□□□□ 0.16
PNKP-213ENST00000599543 CDH15P55291 814 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 SELENOVP59797 346 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 LAPTM4AQ15012 233 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 NKPD1Q17RQ9 610 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 NRN1LQ496H8 165 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 ELFN2Q5R3F8 820 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 RGS7BPQ6MZT1 257 aaPredicted RBP16.07■□□□□ 0.16
PNKP-213ENST00000599543 MBOAT2Q6ZWT7 520 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 SLC16A14Q7RTX9 510 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 IGFN1Q86VF2 1251 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 RDH5Q92781 318 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 MCHR2Q969V1 340 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 FAM46AQ96IP4 442 aaKnown RBP16.07■□□□□ 0.16
PNKP-213ENST00000599543 ZNF347Q96SE7 839 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 CDH20Q9HBT6 801 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 IL1RAPQ9NPH3 570 aa16.07■□□□□ 0.16
PNKP-213ENST00000599543 TMEFF2Q9UIK5 374 aaPredicted RBP16.07■□□□□ 0.16
PNKP-213ENST00000599543 GADD45GO95257 159 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 PTHP01270 115 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 HPXP02790 462 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 SAGP10523 405 aaPredicted RBP16.06■□□□□ 0.16
PNKP-213ENST00000599543 NAT2P11245 290 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 ITGA2P17301 1181 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 ACHEP22303 614 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 GPR6P46095 362 aaPredicted RBP16.06■□□□□ 0.16
PNKP-213ENST00000599543 MYBPC1Q00872 1141 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 PRKCDQ05655 676 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 FLOT2Q14254 428 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 HIST3H3Q16695 136 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 TBC1D28Q2M2D7 210 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 SPATA24Q86W54 205 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 SYT14Q8NB59 555 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 OR51A7Q8NH64 312 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 LRMDAQ9H2I8 198 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 OR51B6Q9H340 312 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 VNN3Q9NY84 501 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 GPR160Q9UJ42 338 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 POMPQ9Y244 141 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 ANK2Q01484 3957 aa16.06■□□□□ 0.16
PNKP-213ENST00000599543 IQCMA0A1B0GVH7 501 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 A0A1W2PRQ8 180 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 EFCAB9A8MZ26 197 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 CENPBD1B2RD01 187 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 CDC42EP2O14613 210 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 CCL2P13500 99 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 PCMT1P22061 227 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 SRP14P37108 136 aaKnown RBP16.05■□□□□ 0.16
PNKP-213ENST00000599543 SRSF2Q01130 221 aaKnown RBP16.05■□□□□ 0.16
PNKP-213ENST00000599543 PLP2Q04941 152 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 RUNX1T1Q06455 604 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 TRAP1Q12931 704 aaKnown RBP16.05■□□□□ 0.16
PNKP-213ENST00000599543 DGCR6Q14129 220 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 ALKBH6Q3KRA9 238 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 MTX3Q5HYI7 312 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 RRM2BQ7LG56 351 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 ADGRG5Q8IZF4 528 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 LRRC18Q8N456 261 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 PAQR4Q8N4S7 273 aaPredicted RBP16.05■□□□□ 0.16
PNKP-213ENST00000599543 OR1J2Q8NGS2 313 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 SNX33Q8WV41 574 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 ASB10Q8WXI3 467 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 DHRS1Q96LJ7 313 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 C19orf24Q9BVV8 132 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 NARFLQ9H6Q4 476 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 INIPQ9NRY2 104 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
PNKP-213ENST00000599543 AURKCQ9UQB9 309 aa16.05■□□□□ 0.16
PNKP-213ENST00000599543 B4DSR2 109 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 ATP5HO75947 161 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 SNAP29O95721 258 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 IGF2P01344 180 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 LCKP06239 509 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 ACADSP16219 412 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 COL8A2P25067 703 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 RAD52P43351 418 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 KLF3P57682 345 aaPredicted RBP16.04■□□□□ 0.16
PNKP-213ENST00000599543 MRPS11P82912 194 aaKnown RBP16.04■□□□□ 0.16
PNKP-213ENST00000599543 TOP3AQ13472 1001 aaPredicted RBP16.04■□□□□ 0.16
PNKP-213ENST00000599543 FAM98BQ52LJ0 330 aaKnown RBP16.04■□□□□ 0.16
PNKP-213ENST00000599543 LIPNQ5VXI9 398 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 CCDC121Q6ZUS5 278 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 ICA1LQ8NDH6 482 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 CANT1Q8WVQ1 401 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 C1orf159Q96HA4 380 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 GPA33Q99795 319 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 FUZQ9BT04 418 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 MRPL13Q9BYD1 178 aaKnown RBP16.04■□□□□ 0.16
PNKP-213ENST00000599543 BCL2L14Q9BZR8 327 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 TRIM15Q9C019 465 aa16.04■□□□□ 0.16
PNKP-213ENST00000599543 KCNN2Q9H2S1 579 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms