RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 VNN3Q9NY84 501 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 SLC7A8Q9UHI5 535 aa18.19■□□□□ 0.5
PNKP-209ENST00000596726 GPRIN2O60269 458 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 DNAJC8O75937 253 aaPredicted RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 PPP1R3DO95685 299 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 SNAP29O95721 258 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 CTLA4P16410 223 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 SLC6A6P31641 620 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 CDKN2AP42771 156 aaKnown RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 GUCA1AP43080 201 aaPredicted RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 PLP2Q04941 152 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 ENDOGQ14249 297 aaKnown RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 PABPC1L2AQ5JQF8 200 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 ZNF620Q6ZNG0 422 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 BIVMQ86UB2 503 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 PAQR4Q8N4S7 273 aaPredicted RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 CPEB3Q8NE35 698 aaKnown RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 OR9Q2Q8NGE9 314 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 SAMD8Q96LT4 415 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 ERMAPQ96PL5 475 aaPredicted RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 GSX1Q9H4S2 264 aaPredicted RBP18.18■□□□□ 0.5
PNKP-209ENST00000596726 CCNB1IP1Q9NPC3 277 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 POLE4Q9NR33 117 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 CMAHPQ9Y471 501 aa18.18■□□□□ 0.5
PNKP-209ENST00000596726 IQCMA0A1B0GVH7 501 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 A0A1W2PPL8 197 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 SSX4O60224 188 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 CCNB2O95067 398 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 MSR1P21757 451 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 PSG4Q00888 419 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 GALK2Q01415 458 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 PPP1R8Q12972 351 aaKnown RBP18.17■□□□□ 0.5
PNKP-209ENST00000596726 SYT9Q86SS6 491 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 OR1J2Q8NGS2 313 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 CANT1Q8WVQ1 401 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 SMR3AQ99954 134 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 CHID1Q9BWS9 393 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 SYT4Q9H2B2 425 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 REEP1Q9H902 201 aa18.17■□□□□ 0.5
PNKP-209ENST00000596726 FBXO9Q9UK97 447 aaPredicted RBP18.17■□□□□ 0.5
PNKP-209ENST00000596726 CR1P17927 2039 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 GSC2O15499 205 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 KHDRBS3O75525 346 aaKnown RBP18.16■□□□□ 0.5
PNKP-209ENST00000596726 F12P00748 615 aaPredicted RBP18.16■□□□□ 0.5
PNKP-209ENST00000596726 GASTP01350 101 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 CCL2P13500 99 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 APEX1P27695 318 aaKnown RBP18.16■□□□□ 0.5
PNKP-209ENST00000596726 EVX1P49640 407 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 PPOXP50336 477 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 EFNA4P52798 201 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 NUDT6P53370 316 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 HSF2Q03933 536 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 MICAQ29983 383 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 TBC1D28Q2M2D7 210 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 UGT2A3Q6UWM9 527 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 SVOPLQ8N434 492 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 OR10H5Q8NGA6 315 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 AKR7LQ8NHP1 331 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 MRPL24Q96A35 216 aaKnown RBP18.16■□□□□ 0.5
PNKP-209ENST00000596726 SORCS2Q96PQ0 1159 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 SNX18Q96RF0 628 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 WACQ9BTA9 647 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 ZNF416Q9BWM5 594 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 CADM1Q9BY67 442 aaKnown RBP18.16■□□□□ 0.5
PNKP-209ENST00000596726 OR2H1Q9GZK4 316 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 NUAK2Q9H093 628 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 WNT5BQ9H1J7 359 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 CDH20Q9HBT6 801 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 IL20Q9NYY1 176 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 POMPQ9Y244 141 aa18.16■□□□□ 0.5
PNKP-209ENST00000596726 SAMHD1Q9Y3Z3 626 aaKnown RBP18.16■□□□□ 0.5
PNKP-209ENST00000596726 DHRS12A0PJE2 317 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 IDH3BO43837 385 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 SLC16A7O60669 478 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 IGFBP1P08833 259 aaPredicted RBP18.15■□□□□ 0.5
PNKP-209ENST00000596726 PCSK6P29122 969 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 PCBD1P61457 104 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 RPS23P62266 143 aaKnown RBP18.15■□□□□ 0.5
PNKP-209ENST00000596726 GK3PQ14409 553 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 POM121L2Q96KW2 1035 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 IFT27Q9BW83 186 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 MRPL37Q9BZE1 423 aaKnown RBP18.15■□□□□ 0.5
PNKP-209ENST00000596726 EGLN3Q9H6Z9 239 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 COA3Q9Y2R0 106 aaPredicted RBP18.15■□□□□ 0.5
PNKP-209ENST00000596726 TIMM10BQ9Y5J6 103 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 CDH10Q9Y6N8 788 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 U3KQV3 271 aa18.15■□□□□ 0.5
PNKP-209ENST00000596726 TCRBV3S1A0A5B6 114 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 C12orf71A8MTZ7 269 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 SMAD7O15105 426 aaKnown RBP18.14■□□□□ 0.49
PNKP-209ENST00000596726 HIST1H1CP16403 213 aaKnown RBP18.14■□□□□ 0.49
PNKP-209ENST00000596726 HOXB6P17509 224 aaKnown RBP18.14■□□□□ 0.49
PNKP-209ENST00000596726 STOMP27105 288 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 APLNRP35414 380 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 DSCR9P59020 149 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 FLOT2Q14254 428 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 RPL13AP3Q6NVV1 102 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 RASSF6Q6ZTQ3 369 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 GLB1L2Q8IW92 636 aa18.14■□□□□ 0.49
PNKP-209ENST00000596726 AQP11Q8NBQ7 271 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms