RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DEAF1O75398 565 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 CD8AP01732 235 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 MMP7P09237 267 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 ZNF35P13682 527 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 NR4A1P22736 598 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 LAP3P28838 519 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 APLNRP35414 380 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 CDKN2AP42771 156 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 RPS23P62266 143 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 HGFACQ04756 655 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 TBC1D28Q2M2D7 210 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 LEG1Q6P5S2 330 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 VHLLQ6RSH7 139 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 MYPOPQ86VE0 399 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 TGIF2LYQ8IUE0 185 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 GLB1L2Q8IW92 636 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 OR4K13Q8NH42 304 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 HTRA1Q92743 480 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 RERGLQ9H628 205 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 EGLN3Q9H6Z9 239 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 ZNF556Q9HAH1 456 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 CDH20Q9HBT6 801 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 BARX1Q9HBU1 254 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 POLE4Q9NR33 117 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 TBC1D23Q9NUY8 699 aa14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 PDP1Q9P0J1 537 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-212ENST00000596163 ANXA8P13928 327 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 HIST1H1CP16403 213 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 CTLA4P16410 223 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 ZNF32P17041 273 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 ADAM8P78325 824 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 SNTB2Q13425 540 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 ETFDHQ16134 617 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 Q5PR19 223 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 CLEC12AQ5QGZ9 265 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 PTCHD4Q6ZW05 846 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 ASRGL1Q7L266 308 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 FBXO17Q96EF6 278 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 NRBF2Q96F24 287 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 NMNAT3Q96T66 252 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 FEVQ99581 238 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 TSSK6Q9BXA6 273 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 NUAK2Q9H093 628 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 COA3Q9Y2R0 106 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 CMAHPQ9Y471 501 aa14.96□□□□□ -0.01
SHKBP1-212ENST00000596163 OTOGQ6ZRI0 2925 aa14.96□□□□□ -0.02
SHKBP1-212ENST00000596163 RAI1Q7Z5J4 1906 aaPredicted RBP14.96□□□□□ -0.02
SHKBP1-212ENST00000596163 OR4A8P0C604 315 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 THBS4P35443 961 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 GLRXP35754 106 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 CDKN1AP38936 164 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 CENPAP49450 140 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 LSM6P62312 80 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 SNRPD2P62316 118 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 SCRN3Q0VDG4 424 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 EFNB3Q15768 340 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 PABPC1L2AQ5JQF8 200 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 C11orf71Q6IPW1 123 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 KRT80Q6KB66 452 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 UNQ6126/PRO20091Q6UXV3 157 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 YTHDF3Q7Z739 585 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 ZNF584Q8IVC4 421 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 OR2T33Q8NG76 320 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 OR52E2Q8NGJ4 325 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 SLCO4A1Q96BD0 722 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 ZNF416Q9BWM5 594 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 CACNG6Q9BXT2 260 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 SRA1Q9HD15 236 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 ARMC1Q9NVT9 282 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 EIF3KQ9UBQ5 218 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 KLHL21Q9UJP4 597 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 B9D1Q9UPM9 204 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 AP4S1Q9Y587 144 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 DSCAMO60469 2012 aa14.95□□□□□ -0.02
SHKBP1-212ENST00000596163 BHLHE40O14503 412 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 SNAP29O95721 258 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 FCGR1AP12314 374 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 CD99P14209 185 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 STOMP27105 288 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 RAD52P43351 418 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 GDI2P50395 445 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 ERFP50548 548 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 PSG4Q00888 419 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 RAB35Q15286 201 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 ADIPOQQ15848 244 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 SWI5Q1ZZU3 235 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 SLC36A3Q495N2 470 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 SLC35F1Q5T1Q4 408 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 C10orf67Q8IYJ2 551 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 LNX2Q8N448 690 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 TEX47Q8TBZ9 253 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 DUS3LQ96G46 650 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 BDH2Q9BUT1 245 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 OR2H1Q9GZK4 316 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 RACGAP1Q9H0H5 632 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 PLK3Q9H4B4 646 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 FKBP7Q9Y680 259 aa14.94□□□□□ -0.02
SHKBP1-212ENST00000596163 H3BN98 237 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 H7C417 338 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms