RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 KTI12Q96EK9 354 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 AMELYQ99218 206 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 KXD1Q9BQD3 176 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 SYT4Q9H2B2 425 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 PCDHB16Q9NRJ7 776 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 COMMD9Q9P000 198 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 B9D1Q9UPM9 204 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 TEX46H3BTG2 121 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 APOC3P02656 99 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 AMY2AP04746 511 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 RAB6AP20340 208 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 CNR1P21554 472 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 CD34P28906 385 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 PPICP45877 212 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 STARP49675 285 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 VEGFBP49765 207 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 MEP1BQ16820 701 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 C1orf100Q5SVJ3 147 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 ACOT7LQ6ZUV0 252 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 MED25Q71SY5 747 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 CATSPERDQ86XM0 798 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 OR8S1Q8NH09 359 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 SLC37A2Q8TED4 501 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 PATE1Q8WXA2 126 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 DVL3Q92997 716 aaPredicted RBP11.94□□□□□ -0.5
VRK3-209ENST00000594948 TAAR8Q969N4 342 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 ZNF416Q9BWM5 594 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 PIGMQ9H3S5 423 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 PRMT8Q9NR22 394 aaPredicted RBP11.94□□□□□ -0.5
VRK3-209ENST00000594948 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
VRK3-209ENST00000594948 MRTO4Q9UKD2 239 aaKnown RBP11.94□□□□□ -0.5
VRK3-209ENST00000594948 KCNK7Q9Y2U2 307 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 SPTBP11277 2137 aa11.94□□□□□ -0.5
VRK3-209ENST00000594948 TRAV36DV7A0A075B6V5 113 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 LOC390937A0A1W2PQ73 354 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 MEIS3P1A6NDR6 274 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 ZNF736B4DX44 427 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 XKRYO14609 159 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 UTS2O95399 124 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 CYB5AP00167 134 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 MT-ATP6P00846 226 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 IL2RAP01589 272 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 IGHMP01871 453 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 TACR3P29371 465 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 RIDAP52758 137 aaKnown RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 BTG2P78543 158 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 MELKQ14680 651 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 CCDC157Q569K6 752 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 PABPC1L2AQ5JQF8 200 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 FAHD2BQ6P2I3 314 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 LRRC69Q6ZNQ3 347 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 PM20D2Q8IYS1 436 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 GATSQ8NAP1 163 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 RELL2Q8NC24 303 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 ZNF519Q8TB69 540 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 STK35Q8TDR2 534 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 ASB5Q8WWX0 329 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 BADQ92934 168 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 C8orf44Q96CB5 159 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 FAHD2AQ96GK7 314 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 PRRT1Q99946 306 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 GMEB2Q9UKD1 530 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 IGLV1-36A0A0B4J1U3 117 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 KLF8O95600 359 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 GP1BAP07359 652 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 RABIFP47224 123 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 CCR4P51679 360 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 RPL27P61353 136 aaKnown RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 PPP1CAP62136 330 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 DHRS2Q13268 280 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 NR0B2Q15466 257 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 SGCBQ16585 318 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 DEFB110Q30KQ9 67 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 RAB12Q6IQ22 244 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 CBLN3Q6UW01 205 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 ATRAIDQ6UW56 229 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 MAMDC2Q7Z304 686 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 SLC25A42Q86VD7 318 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 GALNT16Q8N428 558 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 NKAIN3Q8N8D7 197 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 OR1J2Q8NGS2 313 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 OR13C8Q8NGS7 320 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 ZNF563Q8TA94 476 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 FOXRED1Q96CU9 486 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 LRRC46Q96FV0 321 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 ZNF285Q96NJ3 590 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 SLC46A1Q96NT5 459 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 NPAS1Q99742 590 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 TINAGL1Q9GZM7 467 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 TAS2R3Q9NYW6 316 aa11.93□□□□□ -0.5
VRK3-209ENST00000594948 KLF2Q9Y5W3 355 aaPredicted RBP11.93□□□□□ -0.5
VRK3-209ENST00000594948 PRSS37A4D1T9 235 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 OR6A2O95222 327 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms