RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TGIF2LYQ8IUE0 185 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 SLC30A7Q8NEW0 376 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 WFDC11Q8NEX6 87 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 OR8D4Q8NGM9 314 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 SNX18Q96RF0 628 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 NIPSNAP1Q9BPW8 284 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 CACNG6Q9BXT2 260 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 C1orf198Q9H425 327 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 ZNF442Q9H7R0 627 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 CCNB1IP1Q9NPC3 277 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 DNAJB9Q9UBS3 223 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
VRK3-206ENST00000594090 IDH3BO43837 385 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 E2F6O75461 281 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 KHDRBS3O75525 346 aaKnown RBP12.59□□□□□ -0.39
VRK3-206ENST00000594090 SOX14O95416 240 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 PTHP01270 115 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 SCG5P05408 212 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 HSF2Q03933 536 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 PLP2Q04941 152 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 DAG1Q14118 895 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 ADIPOQQ15848 244 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 PABPC1L2AQ5JQF8 200 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 PRSS57Q6UWY2 283 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 YTHDF3Q7Z739 585 aaKnown RBP12.59□□□□□ -0.39
VRK3-206ENST00000594090 GLB1L2Q8IW92 636 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 SDR9C7Q8NEX9 313 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 TRMT61AQ96FX7 289 aaKnown RBP12.59□□□□□ -0.39
VRK3-206ENST00000594090 FOXN4Q96NZ1 517 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 NMNAT3Q96T66 252 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 FEVQ99581 238 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 RERGLQ9H628 205 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 EMC7Q9NPA0 242 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 TBC1D23Q9NUY8 699 aa12.59□□□□□ -0.39
VRK3-206ENST00000594090 COA3Q9Y2R0 106 aaPredicted RBP12.59□□□□□ -0.39
VRK3-206ENST00000594090 IQCMA0A1B0GVH7 501 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 TIPRLO75663 272 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 RENP00797 406 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 TP53P04637 393 aaPredicted RBP12.58□□□□□ -0.4
VRK3-206ENST00000594090 IGFBP1P08833 259 aaPredicted RBP12.58□□□□□ -0.4
VRK3-206ENST00000594090 OR4A8P0C604 315 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 NR4A1P22736 598 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 APEX1P27695 318 aaKnown RBP12.58□□□□□ -0.4
VRK3-206ENST00000594090 CRABP1P29762 137 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 THBS4P35443 961 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 SERPINF1P36955 418 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 GALK2Q01415 458 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 CCNIQ14094 377 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 SWI5Q1ZZU3 235 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 TBC1D28Q2M2D7 210 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 DNM1P34Q6PK57 102 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 CD300LDQ6UXZ3 194 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 HS3ST5Q8IZT8 346 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 OR52E2Q8NGJ4 325 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 AKR7LQ8NHP1 331 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 TSSK2Q96PF2 358 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 PDP1Q9P0J1 537 aaPredicted RBP12.58□□□□□ -0.4
VRK3-206ENST00000594090 SPEF1Q9Y4P9 236 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 PLCE1Q9P212 2302 aa12.58□□□□□ -0.4
VRK3-206ENST00000594090 IGLV1-36A0A0B4J1U3 117 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 DCTN6O00399 190 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 EBAG9O00559 213 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 DEAF1O75398 565 aaPredicted RBP12.57□□□□□ -0.4
VRK3-206ENST00000594090 CIB2O75838 187 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 SNAP29O95721 258 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 CCL2P13500 99 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 APLNRP35414 380 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 PCBD1P61457 104 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 PSG4Q00888 419 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
VRK3-206ENST00000594090 COX10Q12887 443 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 EFNB3Q15768 340 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 MST1LQ2TV78 715 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 PAQR4Q8N4S7 273 aaPredicted RBP12.57□□□□□ -0.4
VRK3-206ENST00000594090 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
VRK3-206ENST00000594090 OR4Q3Q8NH05 313 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 UTP4Q969X6 686 aaKnown RBP12.57□□□□□ -0.4
VRK3-206ENST00000594090 TSSK6Q9BXA6 273 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 RACGAP1Q9H0H5 632 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 WNT5BQ9H1J7 359 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 FN3KQ9H479 309 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 NTN4Q9HB63 628 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 CDH20Q9HBT6 801 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 RPRD1BQ9NQG5 326 aaKnown RBP12.57□□□□□ -0.4
VRK3-206ENST00000594090 ARMC1Q9NVT9 282 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 BAIAP2Q9UQB8 552 aa12.57□□□□□ -0.4
VRK3-206ENST00000594090 OR6C68A6NDL8 312 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 B9A039 149 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 H7C417 338 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 GPRIN2O60269 458 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 NDUFS7O75251 213 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms