RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ARFGEF3Q5TH69 2177 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 TMEM129A0AVI4 362 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 AQP12BA6NM10 295 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 IMPA2O14732 288 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SSX4O60224 188 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 GPRIN2O60269 458 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SLC16A7O60669 478 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 DNAJC8O75937 253 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CCNB2O95067 398 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 PPP1R3DO95685 299 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 TXNDC12O95881 172 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 GASTP01350 101 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SCG5P05408 212 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CST2P09228 141 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CCL2P13500 99 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 APEHP13798 732 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CTLA4P16410 223 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 ZNF32P17041 273 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 MSR1P21757 451 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 APEX1P27695 318 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SLC6A6P31641 620 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 APLNRP35414 380 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 GLRXP35754 106 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CDKN2AP42771 156 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 NUDT6P53370 316 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SNRPD2P62316 118 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 HSF2Q03933 536 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 PPP1R8Q12972 351 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 BNIP1Q12981 228 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 PABPC1L2AQ5JQF8 200 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 ZNF770Q6IQ21 691 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 ZNF620Q6ZNG0 422 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 FOXL2NBQ6ZUU3 175 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 PTCHD4Q6ZW05 846 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 ADCK1Q86TW2 530 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 AQP12AQ8IXF9 295 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 ADGRG5Q8IZF4 528 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 PAQR4Q8N4S7 273 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CPEB3Q8NE35 698 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 OR9Q2Q8NGE9 314 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 OR1J2Q8NGS2 313 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CANT1Q8WVQ1 401 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 COX4I2Q96KJ9 171 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SAMD8Q96LT4 415 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 DOK1Q99704 481 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SMR3AQ99954 134 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 IFT27Q9BW83 186 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 CHID1Q9BWS9 393 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SYT4Q9H2B2 425 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 PLK3Q9H4B4 646 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 RERGLQ9H628 205 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 REEP1Q9H902 201 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 POLE4Q9NR33 117 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 VNN3Q9NY84 501 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 VSX1Q9NZR4 365 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SLC7A8Q9UHI5 535 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 FBXO9Q9UK97 447 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 SAMHD1Q9Y3Z3 626 aaKnown RBP7.93□□□□□ -1.14
DNMT1-223ENST00000591239 U3KQV3 271 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 RTTNQ86VV8 2226 aa7.93□□□□□ -1.14
DNMT1-223ENST00000591239 DHRS12A0PJE2 317 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 C12orf71A8MTZ7 269 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 SMAD7O15105 426 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 ARPC3O15145 178 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 GSC2O15499 205 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 IDH3BO43837 385 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 KHDRBS3O75525 346 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 SNAP29O95721 258 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 F12P00748 615 aaPredicted RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 CST1P01037 141 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 HIST1H1CP16403 213 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 HOXB6P17509 224 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 STOMP27105 288 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 NOS3P29474 1203 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 EVX1P49640 407 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 PPOXP50336 477 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 RASSF2P50749 326 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 EFNA4P52798 201 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 PCBD1P61457 104 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 RPS23P62266 143 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 PSG4Q00888 419 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 ENDOGQ14249 297 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 FLOT2Q14254 428 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 MSMPQ1L6U9 139 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 MICAQ29983 383 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 TBC1D28Q2M2D7 210 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 UGT2A3Q6UWM9 527 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 DNM1P46Q6ZS02 220 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 SYT9Q86SS6 491 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 BIVMQ86UB2 503 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 SPATA24Q86W54 205 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 GLB1L2Q8IW92 636 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 ALDH16A1Q8IZ83 802 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 SVOPLQ8N434 492 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 AQP11Q8NBQ7 271 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 AKR7LQ8NHP1 331 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 MRPL24Q96A35 216 aaKnown RBP7.92□□□□□ -1.14
DNMT1-223ENST00000591239 FOXN4Q96NZ1 517 aa7.92□□□□□ -1.14
DNMT1-223ENST00000591239 TSSK2Q96PF2 358 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms