RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 MAD2L1BPQ15013 274 aaPredicted RBP12.31□□□□□ -0.44
MBD1-220ENST00000589758 TRAM2Q15035 370 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 TRIP10Q15642 601 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 MOGQ16653 247 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 NKPD1Q17RQ9 610 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 ARMC4Q5T2S8 1044 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 TSEN54Q7Z6J9 526 aaKnown RBP12.31□□□□□ -0.44
MBD1-220ENST00000589758 MEX3DQ86XN8 651 aaKnown RBP12.31□□□□□ -0.44
MBD1-220ENST00000589758 ARHGAP24Q8N264 748 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 ZNF519Q8TB69 540 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 SYNPRQ8TBG9 265 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 FNDC8Q8TC99 324 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 SNX33Q8WV41 574 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 ZNF416Q9BWM5 594 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 TXNIPQ9H3M7 391 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 SIAEQ9HAT2 523 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 SLCO1C1Q9NYB5 712 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 TAAR3PQ9P1P4 343 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 MYEF2Q9P2K5 600 aaKnown RBP12.31□□□□□ -0.44
MBD1-220ENST00000589758 TMEFF2Q9UIK5 374 aaPredicted RBP12.31□□□□□ -0.44
MBD1-220ENST00000589758 COL6A5A8TX70 2615 aa12.31□□□□□ -0.44
MBD1-220ENST00000589758 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.44
MBD1-220ENST00000589758 IGLV3-9A0A075B6K5 115 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 B4DSR2 109 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 LCKP06239 509 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
MBD1-220ENST00000589758 NAT2P11245 290 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 COL8A2P25067 703 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 DVL1P1P54792 670 aaPredicted RBP12.3□□□□□ -0.44
MBD1-220ENST00000589758 MS4A2Q01362 244 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 HSF2Q03933 536 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 PCGF3Q3KNV8 242 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 ALG10Q5BKT4 473 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 UNQ6126/PRO20091Q6UXV3 157 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 DHFR2Q86XF0 187 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 OFCC1Q8IZS5 231 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 LRRC18Q8N456 261 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
MBD1-220ENST00000589758 MOSPD2Q8NHP6 518 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 HDAC2Q92769 488 aaKnown RBP12.3□□□□□ -0.44
MBD1-220ENST00000589758 MCUR1Q96AQ8 359 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
MBD1-220ENST00000589758 BPIFA2Q96DR5 249 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 CCNB1IP1Q9NPC3 277 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 MAN2C1Q9NTJ4 1040 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 NDUFAF4Q9P032 175 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 HIF3AQ9Y2N7 669 aa12.3□□□□□ -0.44
MBD1-220ENST00000589758 C17orf100A8MU93 164 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 PRSS23O95084 383 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 CLPTM1O96005 669 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 TFP02787 698 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 MT-ND5P03915 603 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
MBD1-220ENST00000589758 IFI30P13284 250 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 CCL2P13500 99 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 CD47Q08722 323 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 BNIP1Q12981 228 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 TRIM25Q14258 630 aaKnown RBP12.29□□□□□ -0.44
MBD1-220ENST00000589758 KRTAP24-1Q3LI83 254 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 DNAL1Q4LDG9 190 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 FGD3Q5JSP0 725 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 THEM4Q5T1C6 240 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 LIPNQ5VXI9 398 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 TMEM154Q6P9G4 183 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 TBPL2Q6SJ96 375 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 ZNF730Q6ZMV8 503 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 C7orf34Q96L11 122 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 LRGUKQ96M69 825 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 RBP7Q96R05 134 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 OR51B6Q9H340 312 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 NMNAT1Q9HAN9 279 aaPredicted RBP12.29□□□□□ -0.44
MBD1-220ENST00000589758 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
MBD1-220ENST00000589758 NKIRAS2Q9NYR9 191 aa12.29□□□□□ -0.44
MBD1-220ENST00000589758 PPIHO43447 177 aaKnown RBP12.28□□□□□ -0.44
MBD1-220ENST00000589758 SLC2A10O95528 541 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 IGHMP01871 453 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 SEMG1P04279 462 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 FABP3P05413 133 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
MBD1-220ENST00000589758 RHCEP18577 417 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 STOMP27105 288 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 SRP14P37108 136 aaKnown RBP12.28□□□□□ -0.44
MBD1-220ENST00000589758 GUCA1AP43080 201 aaPredicted RBP12.28□□□□□ -0.44
MBD1-220ENST00000589758 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
MBD1-220ENST00000589758 CBX1P83916 185 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 TEKQ02763 1124 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 CCNIQ14094 377 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 SGCAQ16586 387 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 PABPC1L2AQ5JQF8 200 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 FAM27BQ5VT28 67 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 FAM205BPQ63HN1 556 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 RRM2BQ7LG56 351 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 GLCCI1Q86VQ1 547 aa12.28□□□□□ -0.44
MBD1-220ENST00000589758 NRMQ8IXM6 262 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms