RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SYT9Q86SS6 491 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 SLC22A24Q8N4F4 322 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 BBS1Q8NFJ9 593 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 APH1BQ8WW43 257 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 UBE2FQ969M7 185 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 INTS14Q96SY0 518 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 MYCBPQ99417 103 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 CNN2Q99439 309 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 MNTQ99583 582 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 MARCH7Q9H992 704 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 BLOC1S6Q9UL45 172 aa14.9□□□□□ -0.02
SCAMP4-211ENST00000588907 CCDC182A6NF36 153 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 FAM90A27PA6NNH2 459 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 C12orf71A8MTZ7 269 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 WBP4O75554 376 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 LYZL6O75951 148 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 AGFG2O95081 481 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 CST2P09228 141 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 B4GALT1P15291 398 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 ENTPD1P49961 510 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 AQP6Q13520 282 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 SLC36A2Q495M3 483 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 KLHL22Q53GT1 634 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 TEX30Q5JUR7 227 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 SHFQ7M4L6 423 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 CNIH3Q8TBE1 160 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 ZNF837Q96EG3 531 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 CDADC1Q9BWV3 514 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 SCN3BQ9NY72 215 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 FBXL3Q9UKT7 428 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 LRCH1Q9Y2L9 728 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 POLR1DQ9Y2S0 133 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 AMDHD2Q9Y303 409 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 TMEM14AQ9Y6G1 99 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 COMMD3-BMI1R4GMX3 469 aa14.89□□□□□ -0.03
SCAMP4-211ENST00000588907 ARPC4-TTLL3A0A0A6YYG9 625 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 RAD51DO75771 328 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 UBL3O95164 117 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 WNT11O96014 354 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 CCDC159P0C7I6 412 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 UGT2B10P36537 528 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 ATP6V1E1P36543 226 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 UBE2NP61088 152 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 ADAM8P78325 824 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 SCRN3Q0VDG4 424 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 RAB40BQ12829 278 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 GABRA6Q16445 453 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 SGCAQ16586 387 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 TIMM23BQ5SRD1 257 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 C9orf135Q5VTT2 229 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 SLC16A14Q7RTX9 510 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 ZNF454Q8N9F8 522 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 OR51L1Q8NGJ5 315 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 C11orf40Q8WZ69 217 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 BCL2L2Q92843 193 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 NABP1Q96AH0 204 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 ZMYND19Q96E35 227 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 YIPF3Q9GZM5 350 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 PLCXD1Q9NUJ7 323 aa14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 MRPS18AQ9NVS2 196 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 CNOT2Q9NZN8 540 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-211ENST00000588907 EFCAB10A6NFE3 127 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 WIPF3A6NGB9 483 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 OR5H1A6NKK0 313 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 FAM171A2A8MVW0 826 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 PHYHO14832 338 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 DBTP11182 482 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 PIPP12273 146 aaPredicted RBP14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 CDAP32320 146 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 ARR3P36575 388 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 ACTC1P68032 377 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 ACTA1P68133 377 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 ZNF91Q05481 1191 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 PCK2Q16822 640 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 TBRG1Q3YBR2 411 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 RBM48Q5RL73 367 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 C6orf141Q5SZD1 244 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 SLC16A9Q7RTY1 509 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 BCDIN3DQ7Z5W3 292 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 ERI1Q8IV48 349 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 TIGD4Q8IY51 512 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 OR2AJ1Q8NGZ0 328 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 HSD17B8Q92506 261 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 RNFT2Q96EX2 444 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 YTHDF1Q9BYJ9 559 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 CCNB1IP1Q9NPC3 277 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 TPRKBQ9Y3C4 175 aa14.87□□□□□ -0.03
SCAMP4-211ENST00000588907 FADS2O95864 444 aaKnown RBP14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 TFP02787 698 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 SBK2P0C263 348 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 FAM27E3Q08E93 113 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 TMEM53Q6P2H8 277 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 ZNF511Q8NB15 262 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 GJC3Q8NFK1 279 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 SSC4DQ8WTU2 575 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 IPCEF1Q8WWN9 437 aaPredicted RBP14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 MUCL1Q96DR8 90 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 MRPL48Q96GC5 212 aaKnown RBP14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 ACTR6Q9GZN1 396 aa14.86□□□□□ -0.03
SCAMP4-211ENST00000588907 WDR76Q9H967 626 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms